Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05342 ATGGTGCGTCGCGGTGGTGCTGGTTCTTACTCTTCTTCTCACCGTTCTTCAAGTTCAAACTCCCGCTCAAACACTCATTCAAGTTCATACTCAAGCACTGATTACTACTCTGCTTCTTCTCGTGAATCTCATGCACCTTGCAGCATTCACATTGAAGGTAAATTTGATAATAATGCAATTCAAAATTGGATTAGGGCTAGGAATATTTTTTCATCGGTTGCTGATAGGAAAACCTTAGCTCTAAGAGCAAAGCAACACTTGGTTTATGTTAATTGGAGAATTAGACAATCCAACAATGGAAAATTGTGTTATCTTCCTCCTAATGATAAGCAAATATTCAGTAATCTCTTAGATGCATGTTTATTCCAAGTTTTTAATATTGTTGGCGGTGCTGGCGGTGGCGACGGAGGTAATGGTGATGCTGTTGTTGGTGATTGTGGTGGTGGTGATGCTGTTGGTGTTGATGTTGATGATGTTGATGATAATGATGTTGATGATGATCATGAGGTGGAGGAGGAGGAAGAGCAATTTGATTCACTGGATCAATTACTTTTCAAGAATATTAACATTGGTGATGAATTAACTTGGAGTGTAATTCAAAGGAAAAATGATATTCAAGACGCTATGTTGCAAGATGCACAGCGTATGTTACAATCTTGTTTTTCGGAGACTATAAGAGATATGATAAGGGATACTGTTTTTGGTTTAGAACAATTTGAAGGATTTTATACTTGTGTGGTGGAAAAGGAAGGGAAAGTGGTGTGTGCGGCAACTTTTCGACCACATGAAAGTTTAAGGGGATTGGCGGTCGAAATTCCTTTTGTGGGTACTCTTGAAAGCTTCAGAGGGCAGAATTTGTCACGTAATCTGGTGTCGCAAAATATTGAAGCAGTGAGGATTGATGAGAAGATGGATGGACATTGGCAAATGTAG 933 0.3923 MVRRGGAGSYSSSHRSSSSNSRSNTHSSSYSSTDYYSASSRESHAPCSIHIEGKFDNNAIQNWIRARNIFSSVADRKTLALRAKQHLVYVNWRIRQSNNGKLCYLPPNDKQIFSNLLDACLFQVFNIVGGAGGGDGGNGDAVVGDCGGGDAVGVDVDDVDDNDVDDDHEVEEEEEQFDSLDQLLFKNINIGDELTWSVIQRKNDIQDAMLQDAQRMLQSCFSETIRDMIRDTVFGLEQFEGFYTCVVEKEGKVVCAATFRPHESLRGLAVEIPFVGTLESFRGQNLSRNLVSQNIEAVRIDEKMDGHWQM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05342 310 Gene3D - 199 303 - -
Trre5g05342 310 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 211 298 IPR016181 -
Trre5g05342 310 MobiDBLite consensus disorder prediction 9 30 - -
Trre5g05342 310 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05342 175 299 PHD Transcription Factor Family AT1G05380 27.333 2.80e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05342 - - psom:113271535 61.6178