Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05271 ATGGAGGATTTGGAAAAGAACAGTGGTAACTTTGTTTCAAAGGAAGAAATTAGAGTTTTGATTAAACCTCTTTCCAAACCTCAACTTGTTGATCTTCTCTCTCAACTAGGGTCAAGATATCCTTCAATTGCAGAAGAAATACAAAGTTTTGTAAATGCTGATCCAAAGCAATTTCAATTGCATGGAGAATTTGAGAAAGGGAATCTGATGCTTCATAGAGACACAAGAAAATCGGCTCAGGGTGCAGAGAGACTTCCGAGAAAGCTTGAAGAAACGATCAAAGTATTAGGTACGGCGTTCTCCATAGAAGTGGCCCGTATAGACTATAGAGGTCTCCAAGGCTTGGGACCTTATAGAGGTTTCCACACCGCCATCATAGAAAGTAACGGAATGGTGGTTTCAATAACAACATTTCGACTACACCGTGATATCGCTGAAATAGCTTTTGTTACAACCGTGCAATCGAGACGAAGGGAGGGACTATGTGGATTGTTGTTGCAGGAGTTAGAGAAACATCTTTTGCCACTTTGA 531 0.4068 MEDLEKNSGNFVSKEEIRVLIKPLSKPQLVDLLSQLGSRYPSIAEEIQSFVNADPKQFQLHGEFEKGNLMLHRDTRKSAQGAERLPRKLEETIKVLGTAFSIEVARIDYRGLQGLGPYRGFHTAIIESNGMVVSITTFRLHRDIAEIAFVTTVQSRRREGLCGLLLQELEKHLLPL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05271 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 94 173 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05271 Trre-Chr5 53699418 53701093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05271 88 173 PHD Transcription Factor Family AT5G63900 33.333 1.32e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05271 K12741 - gmx:100776344 79.3369