Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05270 ATGAGCAAGAAGAAAGAAATGGAGGATTTGGAAAAGAACAGTGGTAACTTTGTTTCAAAGGAAGAAATTAGAGTTTTGATTAAACCTCTTTCCAAACCTCAACTTGTTGATCTTCTCTCTCAACTAGGGTCAAGATATCCTTCAATTGCAGAAGAAATACAAAGTTTTGTAAATGCTGATCCAAAGCAATTTCAATTGCATGGAGAATTTGAGAAAGGGAATCTGATGCTTCATAGAGACACAAGAAAATCGGCTCAGGGTGCAGAGAGACTTCCGAGAAAGCTTGAAGAAACGATCAAAGTATTAGGTACGGCGTTCTCCATAGAAGTGGCCCGTATAGACTATAGAGGTCTCCAAGGCTTGGGACCTTATAGAGGTTTCCACACCGCCATCATAGAAAGTAACGGAATGGTGGTTTCAATAACAACATTTCGACTACACCGTGATATCGCTGAAATAGCTTTTGTTACAACCGTGCAATCGAGACGAAGGGAGGGACTATGTGGATTGTTGTTGCAGGAGTTAGAGAAACATCTTTTGCCACTTTGA 549 0.4044 MSKKKEMEDLEKNSGNFVSKEEIRVLIKPLSKPQLVDLLSQLGSRYPSIAEEIQSFVNADPKQFQLHGEFEKGNLMLHRDTRKSAQGAERLPRKLEETIKVLGTAFSIEVARIDYRGLQGLGPYRGFHTAIIESNGMVVSITTFRLHRDIAEIAFVTTVQSRRREGLCGLLLQELEKHLLPL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05270 182 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 102 179 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05270 Trre-Chr5 53699400 53701093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05270 120 179 PHD Transcription Factor Family AT5G63900 40.000 1.03e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05270 K12741 - gmx:100802911 83.5741