Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05263 ATGGGGGCACCGTTTCAAGGAATAATTCAAGATGTCAAAGGAAGAGCTAAATGCTATAAACAAGATTGGGTTTGCGGAATCTATTCCGGCTTTAGCATATTGGCTCCGACTTTCTACATATTCTTTGCTTCTGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGTACAGTAGAAACATTAGCATCTACCGCCATTTGTGGAATTATACACTCAATTATAGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTCTACAGTTTCTGCAAAAATACACCTGAATTGGGTTCCAAGCTCTTTCTAGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCAGTCATGTTAATTATGCTTGCAATTTTTAATGCTTGCACGGTTATTTCGAGATTTACAAGAGTTGCGGTTGCGGAGGAGTTGTTTGGCATGCTAATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTCAGCACTTCCAAGGTTGAAAATCCTTCCTCGGAGGAACTTCAAGCCCAATGGCGGTATACAAATGGACTACTTGCAGTCATTTTCGCCTTTGGACTAATTGTCAGTGCACTTAAAAGCAGAAGAGCAAGATCATGGCAATATGGAACAAGGAAGCTACGGGGCTTTATTGCTGATTATGGTGTTCCATTGATGGTAGTGTTGTGGACTGCAGTATCTTATATAATGCCAGCCTACGTTCCAGACAGTGTTCCTAGAAGGCTGTTTTGTCCACTTCCCTGGGAACCTGCTTCTCTTTATCACTGGACAGTAATGAAGGATATGGCGAAGGTACCCGTGGTTTATATATTTGTGGCAATTATTCCAGCTTTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTGGCTTCTAAGATGGCACAACAGAAAGAATTCAACCTTCAAAATCCATCTGCATACCATTATGATATTTTCCTACTTGGAATAATGACTCTGATTTGTGGTCTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCAGGGTCCCCCATGCATACAAAGAGTTTGGCGGTTCTTAAGAAGCAGCAAATTCGAAAGAGGGTTGTGAAAAGCGCCAAGGAATGCATTCAAGAACAGGGTTCCAGCTCTGAATTATACGGAAAAATGCAAGCTGTGTTCGTTGAAATGAATACAGCCCCTACGGATAGAGAATTAGAGAATTTGAGAGAAGTTGTAATGAGATCTAATACCAAGGCTCGTGCAATGGAACATTTTGATCCTGAGAAATACGTAGAAGGTTCTTTACCAGTTCGGGTTAATGAACAAAGACTGTCCAACTTATTGCAATCCCTCCTGATTGGTGTATCAATAATAGGCATCTACCTTATCAAAAAGATTCCAACTTCACTTTTATGGGGATATTTTGCGTACATGGCAATTGATAGTCTTCCAGGGAACCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCTCCCCAAGCCGCCGTTACAAAATCTTGCAAGGTTCACATGCCTCATTCGTGGAGTCAGTACCATTCAAGACCATCGCTGGATTTACAGCCTTACAGTTGGCATATTTTCTGTTCTGTTTTGGGGTCACATGGATACCTGTTGGTGGAATACTGTTTCCGCTACCATTCTTCCTTCTCATAGTTCTAAGAGAACACTTGCTACCAAAGCTATTCGATCCTGACCATCTTCAGGAACTAGATGCTTCTGAGTACGAGGAAATTGTTGGCGGTCCACGTCTGGGTAACGGGCCAGTTGATGGTGATACCGATGGAAGCTCAAATGATTACTATGATGCAGAGTTATTGGATGAGATGACAACCAGCAGAGGAGAGTTGAAACTTAGAACTGTAAGCACCAATGATCGAAACCGAAGTACCAGCTTCAGTGATCGAAACCGAAGTACCAGTACCAGCTTCAGTGATCGAAACCACAGTATCAGCTTCAATGAAAACAGACGCATTTAA 2028 0.4211 MGAPFQGIIQDVKGRAKCYKQDWVCGIYSGFSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTYLYSFCKNTPELGSKLFLAWAGWVCVWTSVMLIMLAIFNACTVISRFTRVAVAEELFGMLITVLFFQEAIKGLIGEFSTSKVENPSSEELQAQWRYTNGLLAVIFAFGLIVSALKSRRARSWQYGTRKLRGFIADYGVPLMVVLWTAVSYIMPAYVPDSVPRRLFCPLPWEPASLYHWTVMKDMAKVPVVYIFVAIIPALMIAGLYFFDHSVASKMAQQKEFNLQNPSAYHYDIFLLGIMTLICGLLGLPPSNGVLPGSPMHTKSLAVLKKQQIRKRVVKSAKECIQEQGSSSELYGKMQAVFVEMNTAPTDRELENLREVVMRSNTKARAMEHFDPEKYVEGSLPVRVNEQRLSNLLQSLLIGVSIIGIYLIKKIPTSLLWGYFAYMAIDSLPGNQFWERILLLFISPSRRYKILQGSHASFVESVPFKTIAGFTALQLAYFLFCFGVTWIPVGGILFPLPFFLLIVLREHLLPKLFDPDHLQELDASEYEEIVGGPRLGNGPVDGDTDGSSNDYYDAELLDEMTTSRGELKLRTVSTNDRNRSTSFSDRNRSTSTSFSDRNHSISFNENRRI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05263 675 FunFam probable boron transporter 2 15 57 - -
Trre5g05263 675 Gene3D Helical hairpin bin 15 57 - -
Trre5g05263 675 MobiDBLite consensus disorder prediction 640 666 - -
Trre5g05263 675 MobiDBLite consensus disorder prediction 634 675 - -
Trre5g05263 675 PANTHER ANION EXCHANGE PROTEIN 2 596 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre5g05263 675 Pfam HCO3- transporter family 448 538 IPR011531 GO:0006820|GO:0016020
Trre5g05263 675 Pfam HCO3- transporter family 195 374 IPR011531 GO:0006820|GO:0016020
Trre5g05263 675 Pfam HCO3- transporter family 4 188 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05263 Trre-Chr5 53644090 53649390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05263 3 642 Antiporters AT5G25430 65.596 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05263 K24194 - gmx:100787412 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05263 5 53644090 53649390 Trre5g05263 5 53644090 53649390 ECH
Trre5g05263 5 53644090 53649390 Trre11g04814 11 59311519 59315480 ECH
Trre5g05263 5 53644090 53649390 Trre1g00718 1 5404367 5408584 ECH
Trre1g00718 1 5404367 5408584 Trre5g05263 5 53644090 53649390 PCT