Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05223 ATGAGTGGCGAAGTTGAATTTGAGAACTCGCCAGAGGTCAGTCCGACCTGGGTAATTGCAGGCAGCACCGTCATGTTCGTCATTTCTTACGCCGTGGTACAAATTTTATACGGTCTTAGAAATTTTGTAAAGAAGCACCATCTGCCGATTTACCCAGCTCTCAAGAAGGTCACTGAAGTGTTAGTGGAACAGTTGCCGCTTTTGGGTCTTATTTCTGTGTTTCTGAAGTTATTTGGAAACCTCCTTACCAAAATATGCGTTCCTCCCAGTGTATTCCACCACGACATGTTTCTTCCCTGTAATCCCGCAGATCGCCGCCAAGGAGAAGCAGAAAGACAAGCCAACGCCCATCCTACAACGTCCTCTTTCTGTTCTTCCAAGAGCAAGGTTCCTTTATTATCTGCTGAAGCTGTGCAACAGATCCACATCTTTATTTTCCTCCTCGGCACGGTGTACTTCATATTGTCCTTTATCATCTTTCGTTTTGGAAGCGTAACAATACATTGCTGGCAAAAATATAATACAGGCAAAAGGGAACCCAATTATCATTATCAAAATGTTATGATAACAAAGTTGGATAATTTTCAACGATCACGCAATGATCGCTTTTTTCGTTTAAAGATTTTATGTCAATTCTTTTTCAAGCAATTTATGGGTTTTGTGACCGAATCAGATTATATGGCATTCGCGTTTGATTTCTGTAATGTCCATCGTCGTGAGTATGACATCGCATACGGATTGAAAGAATTTCATAAAGAGATTAGTTCTTCCCATGAAAAGAATTTCAGGCAAATTGTTGGCATAAGGGGGTGCATGGAGAATCATTTGAGGAAGTATGAGCCCAAAACCCTTAGAACGAAGAAGGGTGACTTACCTCTTGTTAGGGCCGCTTCCACTATAATTAATAACTCTGAAGGGGTGTTGTTAGCAGTTGGGCCAGAAAGAGGTGACAAAGCCCTAGTTCCGGTTTCTTCCAAAAAACCAGAGTCTTCCAAAAAAACACCCTTAACAAAAGGACCCAGGAAGTCCACGTGTATTAGTGGCCAATCGAATCTACCACGTGACAGCAGAAAAAACATTCCTAATCTTCTTTTCAACAAAACTCGTTTGCTGGCTACCAATCTTCAATCAGCACCTCGTCGGAAGAAGAGTTCTAAGAAATCTCGTGGGGAAAATAGGAGTGACCTGGGTGATGAAGCATCTGACTCGATTCATAATCATGATAGTGCTACGAATACTTTAAAAGAAGACAGAAGTGACATTAACGATATTGAGATTGAGGTTGTTCTGCCACACATCCCTGGTCCGGCGACTGAATTATCTCCCTTGGCGGAGTGCGTCGTTTCAGGTATGGATTCAATTATATTGCCTGAAGGTGATACTTCTGTCAGGCGAAAAGTAGAGGTATCCAAATTGATTGATATTGTTGAGGAGGTGGGTTTGAAGTTTCATGGAGAGATATGGGAGGATTTGGCTAGATTGTTAGATATGGATTATGAAGAGAAGGAAGGTTGGGAGATGAGAAGTGGTAATTCAAGTGTTCAATGA 1548 0.4167 MSGEVEFENSPEVSPTWVIAGSTVMFVISYAVVQILYGLRNFVKKHHLPIYPALKKVTEVLVEQLPLLGLISVFLKLFGNLLTKICVPPSVFHHDMFLPCNPADRRQGEAERQANAHPTTSSFCSSKSKVPLLSAEAVQQIHIFIFLLGTVYFILSFIIFRFGSVTIHCWQKYNTGKREPNYHYQNVMITKLDNFQRSRNDRFFRLKILCQFFFKQFMGFVTESDYMAFAFDFCNVHRREYDIAYGLKEFHKEISSSHEKNFRQIVGIRGCMENHLRKYEPKTLRTKKGDLPLVRAASTIINNSEGVLLAVGPERGDKALVPVSSKKPESSKKTPLTKGPRKSTCISGQSNLPRDSRKNIPNLLFNKTRLLATNLQSAPRRKKSSKKSRGENRSDLGDEASDSIHNHDSATNTLKEDRSDINDIEIEVVLPHIPGPATELSPLAECVVSGMDSIILPEGDTSVRRKVEVSKLIDIVEEVGLKFHGEIWEDLARLLDMDYEEKEGWEMRSGNSSVQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05223 515 MobiDBLite consensus disorder prediction 374 418 - -
Trre5g05223 515 MobiDBLite consensus disorder prediction 337 359 - -
Trre5g05223 515 Pfam Mlo family 12 269 IPR004326 GO:0006952|GO:0016020
Trre5g05223 515 PANTHER MLO-LIKE PROTEIN 1 12 269 IPR004326 GO:0006952|GO:0016020
Trre5g05223 515 MobiDBLite consensus disorder prediction 388 418 - -
Trre5g05223 515 MobiDBLite consensus disorder prediction 319 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05223 Trre-Chr5 53392495 53401111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05223 10 268 MLO family AT4G02600 33.333 1.15e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05223 K08472 - aew:130795230 150.984