Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05221 ATGACAGTGGATTGTTGGAAGCGAAGATGGTATCTTTGGGTCTTTTTGGTCTTCTTCTTGTTGCTAAATGTCCATGGTTGGCATGCATATTTCTGGATTTCTTTTATTCTTATTATTCTTCTAATTATTATGCACATTATTCTGAAGCGTATAGTGACCCGGGTAGCTCTTAGAATAACTGAAAATTATGCACGCAAAATTGGTAGAGAGGATTTGATTATACAACAATCAGATAAGCACTTTTGGTTTCATCCGCCCAGCGTTATCCTTTTCCAGAAATTGGTTCAACATTTGATTCGCTTTATCCTTTTCCAAAATGCTTATCAGATGGCAATTTTTGTGTGGATAGGGATTACATTTGGATTTGACTCCTGTATGATGGAACAACTTTATTACCCTGTTCCAAAGCTCATTATTGGGGTATGTACTCTGGGACTGTGTGGCTACAGCACCCTACCACTATATGCAATTGTTACAGAGATGGGAGATGCATTTAGTCAGGAAAGATTAGATGATATTATCGAAATGGGCCATATAGAATGA 543 0.3738 MTVDCWKRRWYLWVFLVFFLLLNVHGWHAYFWISFILIILLIIMHIILKRIVTRVALRITENYARKIGREDLIIQQSDKHFWFHPPSVILFQKLVQHLIRFILFQNAYQMAIFVWIGITFGFDSCMMEQLYYPVPKLIIGVCTLGLCGYSTLPLYAIVTEMGDAFSQERLDDIIEMGHIE 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05221 180 PANTHER MLO-LIKE PROTEIN 1 9 172 IPR004326 GO:0006952|GO:0016020
Trre5g05221 180 Pfam Mlo family 9 172 IPR004326 GO:0006952|GO:0016020
Trre5g05221 180 SUPERFAMILY MFS general substrate transporter 15 118 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05221 Trre-Chr5 53385997 53388202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05221 10 177 MLO family AT4G02600 48.214 1.79e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05221 K08472 - gmx:100785800 162.925