Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05189 ATGGTAGTAGTAGTAGTAGTACCAAAACATTGGTTTTCATCATCCCATGTTATTGTTCTTGTTCTCTTCATCTTCCTCATGTCAAAACCATGTTTCTGTCGTGTTCAATACATCGGCAAAATCTTACCTGGTACTCAAGTTTCACAAATGGATTGGATTGACACAGCAGGAAAATTCCTCCTCTCGCAAAACAAAAATTTTGCTTTCGGGTTTGTCACCACCGCCAACGACAGCACCAAGTTTCTATTAGCAGCAGTTGTTCATGTATCAAGCTCCACCGTGATTTGGACTGCTAATAGAGCAAAACCTGTTTCTAATTCTGATAATTTTGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGAGTTTTGATTTGGTCCACAAACACAATTAACAAGGGGGTTTCTTCAATGGTGTTGCAGGATAATGGAAATTTGGTTTTGCTTGGGAGTGATAACAGTACGGTAATTTGGCAAAGTTTTGATTTTCCTACTGATACTTTGTTGTCTGAACAGGTTTTCAAAGAAGGAATGAAACTTACTAGTGAACCTAGTTCAAATAATTTGACCTATGTTCTTGAGATTAAATACGGTAATGTTGTTCTTTCAGCTGCTTTCAAAATTCCACAGGTTTATTGGTCTATGCAGAATGATAAACGTAAAATCATTGATAAGGATGGTGATGTTGTGGTTTCATCGAATCTAAGTGATAATTCTTGGAGATTTTATAATGAGAAAAAATCTTTGTTGTGGCAATTCATTTTCTCTGATCATGTAGGTTTGAATGCTATTTGGATTGTTGTTTTGGGAAGAGATGGTGTTATTACTTTCTCCAGTCTTAACAGTGGTGGATTCATCGGTGATTCTTCGACAAGGATACCGCAAGATCCTTGTGGTACACCGGAGTCTTGTAATCCTTATTATATATGTACAGGCAACCATGCGTGTAGTTGTCCTTCTGTTGTTCCTAGTTGTAAACCTGGTTTTGTTTCTGCTTGTGATGAAAAATCAGAAAAGTCTATTGAATTTCTGAAAGGTGATGATGGGCTTGATTACTTTGCACTTGATTTTCTTCAGCCCTTTTCAAAAACCAATTTGCTCGGTTGTCAAACGTCTTGCCGTGGAAATTGCTCTTGTCTTGCAATGTTCTTTCATAAAAGTTCAGGAAACTGTTTCCTGTTGGAAAGTGTAGGAAGTTTTCAGAAATCTGATGATGGCGATTCTGGTTATGTTTCTTACATTAAGGTCTCAAGCGATGGAAAGTCAAAAGGAAGTGGAAGCAGCAATAAACACATCATTGTTGTTGTTGTAATTGTCATATTAACTTTGTTTGTAATTTCTCTTCTGCTCTTTGTTGGGGTTAGATACTACCGGAAAAAGAAAAGGTTACCTAGAGAGAATTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGTATGCCAACCCGTTACCAATACAAAGATCTCGAAGTTGCAACTAATAATTTCTCAGAGAAGCTTGGCTCAGGAGGTTTTGGTTCAGTTTACAAAGGAACTCTACTTGATGGAACTCAATTAGCTGTGAAGCAGCTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCTGAAGTTAACATCATTGGAAGCATTCATCACCTTAATTTGGTAAGGCTCAAAGGTTTTTGTGCTGATGGGACACACAGGCTTCTAGTTTATGAGTTTATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAGAGGTGATTTTCTTTTGGATTGGGATTCTAGGTTTAACATAGCAGTAGGAACAGCAAAAGGGCTAGCTTATTTACACGAAGATTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCCGAAAATGTACTCCTTGATGATCATTTCACGGCTAAAGTTTCAGATTTTGGTTTAGCCAAGCTCATGAATAGAGAACAAAGTCATGTTTTTACAACAATGAGAGGAACACGCGGCTACCTTGCACCTGAATGGATAACAAACTACGCAATATCAGAGAAAAGTGATGTATACAGCTATGGAATGGTGTTGCTAGAGATAATCGGAGGAAGGAAGAATTATGATACTAATGAGAGTTCAGAGAAAAGATATTTTCCTAATTTTGCTTTTAAGATGATGGAAAAAGGGAAAACGAGAGATATACTTGATTCTGAGCTTGAAATTGATGAGCATGATGATAGGGTTCAATGTGCTATAAGGGTAGCATTGTGGTGCATACAAGAAGACATGTCTATGAGACCTTCAATGACTAAAGTTGTTCAAATGTTGGAAGGTCTATGTCCTGTTCCTATATCATCTAGTGAAGGTGGTAACTCTTCTGGTCCATCAGATTGTAATAGTAATGCTGATGATCTATCAGCAGTTCGTCTTTCTGGCCCAAGATAA 2415 0.3727 MVVVVVVPKHWFSSSHVIVLVLFIFLMSKPCFCRVQYIGKILPGTQVSQMDWIDTAGKFLLSQNKNFAFGFVTTANDSTKFLLAAVVHVSSSTVIWTANRAKPVSNSDNFVFDKKGNAFLQKDGVLIWSTNTINKGVSSMVLQDNGNLVLLGSDNSTVIWQSFDFPTDTLLSEQVFKEGMKLTSEPSSNNLTYVLEIKYGNVVLSAAFKIPQVYWSMQNDKRKIIDKDGDVVVSSNLSDNSWRFYNEKKSLLWQFIFSDHVGLNAIWIVVLGRDGVITFSSLNSGGFIGDSSTRIPQDPCGTPESCNPYYICTGNHACSCPSVVPSCKPGFVSACDEKSEKSIEFLKGDDGLDYFALDFLQPFSKTNLLGCQTSCRGNCSCLAMFFHKSSGNCFLLESVGSFQKSDDGDSGYVSYIKVSSDGKSKGSGSSNKHIIVVVVIVILTLFVISLLLFVGVRYYRKKKRLPRENSEEDNFLENLTGMPTRYQYKDLEVATNNFSEKLGSGGFGSVYKGTLLDGTQLAVKQLEGIGQGKKEFRAEVNIIGSIHHLNLVRLKGFCADGTHRLLVYEFMANNSLDKWIFKKKRGDFLLDWDSRFNIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFTAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDTNESSEKRYFPNFAFKMMEKGKTRDILDSELEIDEHDDRVQCAIRVALWCIQEDMSMRPSMTKVVQMLEGLCPVPISSSEGGNSSGPSDCNSNADDLSAVRLSGPR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05189 804 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Trre5g05189 804 FunFam Serine/threonine-protein kinase 47 164 - -
Trre5g05189 804 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05189 804 ProSiteProfiles Bulb-type lectin domain profile. 45 163 IPR001480 -
Trre5g05189 804 PIRSF SRK 10 795 IPR024171 GO:0004674
Trre5g05189 804 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05189 804 CDD STKc_IRAK 502 769 - -
Trre5g05189 804 Gene3D Transferase(Phosphotransferase) domain 1 571 773 - -
Trre5g05189 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 218 IPR036426 -
Trre5g05189 804 MobiDBLite consensus disorder prediction 776 804 - -
Trre5g05189 804 Gene3D - 53 164 IPR036426 -
Trre5g05189 804 SMART blect_4 51 166 IPR001480 -
Trre5g05189 804 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g05189 804 Pfam D-mannose binding lectin 93 176 IPR001480 -
Trre5g05189 804 SUPERFAMILY Protein kinase-like (PK-like) 476 767 IPR011009 -
Trre5g05189 804 CDD B_lectin 57 166 IPR001480 -
Trre5g05189 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Trre5g05189 804 FunFam S-receptor-like kinase 5 571 775 - -
Trre5g05189 804 Gene3D Phosphorylase Kinase; domain 1 459 570 - -
Trre5g05189 804 FunFam serine/threonine-protein kinase PBS1-like 464 570 - -
Trre5g05189 804 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 121 436 IPR011047 -
Trre5g05189 804 MobiDBLite consensus disorder prediction 776 796 - -
Trre5g05189 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 52 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05189 Trre-Chr5 53076529 53078943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05189 443 772 Receptor kinase-like Gene Family AT5G20050 46.479 2.98e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre5g05189 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05189 - - tpra:123882999 1367.44