Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05175 ATGTTTGCTGAAGAAAATGGTCTTAAGGGAGACCCAAGATTACAACACATCTCTCAATCCATCAGAGTCGTCCCTCACTTCCCCAAAAATGGAATAATGTTCCAAGATATAACGACATTGTTGTTAGATCATAAGGCGTTTAAAGATACTGTCGATATTTTTGTCGATCGCTACAGAGACATGCACATTTCAGTTGTTGCTGGAATTGAAGCACGTGGGTTTGTGTTTGGTTCCTCAGTTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCGGAAGCTACCAGGTGAAGTCATTTTCGAAAAATATTCTCTAGAATATGGAACTGATTGCTTGGAGCTGCATGTCGGTGCTGTCAAACCTGGTGAACGTGCTATAGTTATTGACGACTTGGTAGCAACAGGTGGAACTTTGTCTGCAGGAATAAGACTTTTAGAACGTGCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATTGGTGTGCCTGAGGTTAAGGGACGGTGTAAACTGCTTGGAAAGCCACTTTATGTTCTTGTGGAGCCACGTCAAGTAGATGAATGCTTTTGA 576 0.4288 MFAEENGLKGDPRLQHISQSIRVVPHFPKNGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFVFGSSVALGIGAKFVPLRKPRKLPGEVIFEKYSLEYGTDCLELHVGAVKPGERAIVIDDLVATGGTLSAGIRLLERAGAEVVECACVIGVPEVKGRCKLLGKPLYVLVEPRQVDECF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05175 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Trre5g05175 191 CDD PRTases_typeI 51 183 IPR000836 -
Trre5g05175 191 Gene3D - 6 184 IPR029057 -
Trre5g05175 191 SUPERFAMILY PRTase-like 19 177 IPR029057 -
Trre5g05175 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Trre5g05175 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Trre5g05175 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre5g05175 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05175 Trre-Chr5 52968031 52970941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05175 11 183 PRT Gene Family AT1G27450 71.098 9.21e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05175 K00759 - gmx:100499904 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05175 5 52968031 52970941 Trre5g05175 5 52968031 52970941 ECH