Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05107 ATGGCTTGTTCCTCAAAAACTGCTTCTACTTCTCTATTGTTTCTGTTCCTTCTCTTTGGCTTCTCTGCAGCTAAGGAACTTTTGGTTGGTGGTAAAATAGATTCATGGAAGGTTCCATCTTCTGAAGCTGATTCACTCAATCGATGGGCTGAAAAGTCTCGATTCAATGTCGGTGATCATCTTGTGTGGAAATATGATGGTGGAAAAGACTCAGTTTTGCAAGTAAACAAAGAAGATTATGCTAATTGCAACATCTCCAACCCCATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGTTAGACCGTTCTGGACCATTCTACTTCATCAGTGGAGCAAAAGGTCACTGTGAGAAGGGGCAAAAACTCACTGTGGTTGTTATTTCACCAAGGCGAAGATACCGCGGCGTTTCTCCTGCACCTTCTCCAGCAGAGTTGGAATACAGTGGAGTTTCTCCTGCACTTTCTCCAGCAGAGTTGGAACAAGGTCCAGCTGTTGCTCCTACTAGCAGTGCCCCAGTGTTGAAAACTGGCCTTGTGATGGTTATGGGACTATTAGCTATTTATGTGGGTTTTTTCATTTGA 585 0.4342 MACSSKTASTSLLFLFLLFGFSAAKELLVGGKIDSWKVPSSEADSLNRWAEKSRFNVGDHLVWKYDGGKDSVLQVNKEDYANCNISNPIEEYKDGNTKVKLDRSGPFYFISGAKGHCEKGQKLTVVVISPRRRYRGVSPAPSPAELEYSGVSPALSPAELEQGPAVAPTSSAPVLKTGLVMVMGLLAIYVGFFI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05107 194 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Trre5g05107 194 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Trre5g05107 194 PANTHER BLUE COPPER PROTEIN 26 152 IPR039391 GO:0009055
Trre5g05107 194 Gene3D - 23 131 IPR008972 -
Trre5g05107 194 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Trre5g05107 194 CDD OsENODL1_like 25 128 IPR041846 -
Trre5g05107 194 FunFam Early nodulin-like protein 1 24 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05107 Trre-Chr5 52381269 52381947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05107 10 186 Phytocyanin Superfamily AT2G25060 52.247 1.27e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05107 - - tpra:123897354 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05107 5 52381269 52381947 Trre5g05107 5 52381269 52381947 ECH