Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05094 ATGGGATATCTCAATTCTGCTTTGTCATCTTCAAGTCAGGCTCAAGATGATGCACCGGTTAGCGGCGGTGGTCTCAGTCACAATGGAAAGTTTAGCTATGGGTATGCTAGCTCGGCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAACCGTTGGCCTTTTCGGAGTCTTTGATGGTCATGGCGGTATTCGCGCTGCTGAGTATGTTAAGAAAAACTTGTTTAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGACAATGAATATCTGAAATCAGAAAACAATCATCACAAAGATGCGGGATCTACTGCATCTACTGCCATTCTAGTTGGAGATCGTTTGCTTGTTGCAAATGTTGGGGATTCCAGGGCCGTTATATGCAGGGGTGGTACTGCAATTGCTGTTTCTCGAGATCATAAGCCAGACCAAACAGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTCGGTGATAGACTTTTGAAGCAGTATGTTGTCGCGGATCCAGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCCAGTGATGGGCTATGGGATGTCGTCACAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGGAGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACTTGTGTCGTCGTTCGTTTCTTGGTGAACCAAGGCACTTCTTCTCAAGTAGCTCCCCGTAACCAGGGCACTTCTTCTCAAGTAGCTCCGCATAATTAA 912 0.4408 MGYLNSALSSSSQAQDDAPVSGGGLSHNGKFSYGYASSAGKRSSMEDFYETRIDGVDGETVGLFGVFDGHGGIRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDNEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPIGDAEEAAKRLMQEAYQRGSADNITCVVVRFLVNQGTSSQVAPRNQGTSSQVAPHN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05094 303 Pfam Protein phosphatase 2C 58 271 IPR001932 -
Trre5g05094 303 CDD PP2Cc 31 278 IPR001932 -
Trre5g05094 303 Gene3D - 24 283 IPR036457 -
Trre5g05094 303 FunFam probable protein phosphatase 2C 59 24 282 - -
Trre5g05094 303 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Trre5g05094 303 SMART PP2C_4 22 276 IPR001932 -
Trre5g05094 303 SMART PP2C_SIG_2 27 278 IPR001932 -
Trre5g05094 303 MobiDBLite consensus disorder prediction 1 23 - -
Trre5g05094 303 ProSiteProfiles PPM-type phosphatase domain profile. 32 278 IPR001932 -
Trre5g05094 303 SUPERFAMILY PP2C-like 26 278 IPR036457 -
Trre5g05094 303 MobiDBLite consensus disorder prediction 1 19 - -
Trre5g05094 303 PANTHER PROTEIN PHOSPHATASE 21 277 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05094 Trre-Chr5 52278049 52281731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05094 1 294 PP2C-type Phosphatase Gene Family AT4G31750 84.950 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05094 K17506 - gmx:100797070 512.301