Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05092 ATGAGAACCATAACAAACACTAACTCATTAGCACCTTCATCATCAACATCTTCAATGACTCATTCATCATGGCACTCGCCGATTCCGTATCTTTTCGGAGGCCTAGCAGCGATGCTAGGCCTCATAGCTTTTGCTCTATTGATTTTAGCTTGTTCTTATTGGAGACTCTCTGGTCAATTACAAGACGACGAAGAAAACAACAACAATAACAGAAACATAGAGAATGAAAAAGAAAGTGAAAATTCAAAGAACGAATCTATTAAAGTTTATGAAGAGAAAATTCTTGTCATTATGGCTGGTGATCAGAATCCAACGTTTTTAGCTACACCTGTTTTTCCTAAATCATCTTTTGTTATAGATCTAAACGCCGCGAATCATTCCGATAAACAGCAAGAAAATCATGAATCTGTTGAGAAATCAGAGAAAGAAGAAATGGAAACAGAAGAACAGAGTGAGCATCAGTGA 465 0.3677 MRTITNTNSLAPSSSTSSMTHSSWHSPIPYLFGGLAAMLGLIAFALLILACSYWRLSGQLQDDEENNNNNRNIENEKESENSKNESIKVYEEKILVIMAGDQNPTFLATPVFPKSSFVIDLNAANHSDKQQENHESVEKSEKEEMETEEQSEHQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05092 154 MobiDBLite consensus disorder prediction 127 154 - -
Trre5g05092 154 MobiDBLite consensus disorder prediction 67 85 - -
Trre5g05092 154 MobiDBLite consensus disorder prediction 123 154 - -
Trre5g05092 154 MobiDBLite consensus disorder prediction 1 22 - -
Trre5g05092 154 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 3 151 IPR040359 GO:0080143
Trre5g05092 154 MobiDBLite consensus disorder prediction 60 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05092 Trre-Chr5 52259245 52259709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05092 1 116 Glutamine Dumper (GDU) Family AT4G31730 49.180 2.54e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05092 - - cam:101490824 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05092 5 52259245 52259709 Trre5g05092 5 52259245 52259709 ECH