Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05051 ATGGCCAATAACAGTAACCTTTATCAGGAACAAATTCTCACCATTGATGATGGTCCTTCATCTATTCTTCACACCCCTCCAAATATCTTAACCTCAAACCACATTCATCACTCTATTCTTCAACACTATCATTATTCACAATCTCCCCATAACACACAACAACAACAACAAAATCAAGGATGGAAAGAACAATGTCACCAAGAATATCAACATTTTTATCAATCCCATCAATATAATGACCCACTTAAATTCCAACCACAACAACAACAAACACATTCTTTGAGTAACAATATTGTAAATCGCTACGTCGATTGCGAAGAATCCACCGCCACATTATCATTTTGGAAAGCATTCAACAACACAGTGCAATCAGATTCAACAGAAAAACAACAACATGAGAGATGTTTGGTTTCGGACAACAACTTCGGCGAGCTAGAAGCTGTGTACAAATACAAACTTGGTCGTAATCATCAAGCGGCGTTCATCGAGAAACATGATGACTCAAAGAGAAAAGCTAGGAAGAAGAGGAGAAAGAAGAGATTGAAAGAAGAAATGAGTATGATGAATAGATTCTTTAAAAGATTAACGAAAAGTATGGTTAATCATCAAGAGGTTCTGCAGAATAAATTGTTGGAGGTGATTGAAAGAATGGAGAAAGAAAGAATAGAGAGGGAAGAAAATTGGAGGCGTGAAGAAAATGAGATATATGAAAGAGAAGCTATTGTGAATGCACGTGAGAGAGATCTTGCTAAACTGAGACAGTGTTCCATTGTTTCCAACATTGAGAAAATAACTGGTCGAAGATTCAATATGTGTGTAACAATGCCTTCTTCTAGTTCTAGCTAG 846 0.3652 MANNSNLYQEQILTIDDGPSSILHTPPNILTSNHIHHSILQHYHYSQSPHNTQQQQQNQGWKEQCHQEYQHFYQSHQYNDPLKFQPQQQQTHSLSNNIVNRYVDCEESTATLSFWKAFNNTVQSDSTEKQQHERCLVSDNNFGELEAVYKYKLGRNHQAAFIEKHDDSKRKARKKRRKKRLKEEMSMMNRFFKRLTKSMVNHQEVLQNKLLEVIERMEKERIEREENWRREENEIYEREAIVNARERDLAKLRQCSIVSNIEKITGRRFNMCVTMPSSSSS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05051 281 Coils Coil 164 184 - -
Trre5g05051 281 PANTHER FI21293P1 51 267 - -
Trre5g05051 281 Coils Coil 207 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05051 Trre-Chr5 51928290 51929450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05051 191 265 Trihelix Transcription Factor Family AT1G76880 38.667 1.15e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05051 - - tpra:123894204 389.808