Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05050 ATGCAGTCTCCCTATGAAATGGCCAATAACAGTAACCTTTATCAGGAACAAATTCTCACCATTGATGATGGTCCTTCATCTATTCTTCACACCCCTCCAAATATCTTAACCTCAAACCACATTCATCACTCTATTCTTCAACACTATCATTATTCACAATCTCCCCATAACACACAACAACAACAACAAAATCAAGGATGGAAAGAACAATGTCACCAAGAATATCAACATTTTTATCAATCCCATCAATATAATGACCCACTTAAATTCCAACCACAACAACAACAAACACATTCTTTGAGTAACAATATTGTAAATCGCTACGTCGATTGCGAAGAATCCACCGCCACATTATCATTTTGGAAAGCATTCAACAACACAGTGCAATCAGATTCAACAGAAAAACAACAACATGAGAGATGTTTGGTTTCGGACAACAACTTCGGCGAGCTAGAAGCTGTGTACAAATACAAACTTGGTCGTAATCATCAAGCGGCGTTCATCGAGAAACATGATGACTCAAAGAGAAAAGCTAGGAAGAAGAGGAGAAAGAAGAGATTGAAAGAAGAAATGAGTATGATGAATAGATTCTTTAAAAGATTAACGAAAAGTATGGTTAATCATCAAGAGGTTCTGCAGAATAAATTGTTGGAGGTGATTGAAAGAATGGAGAAAGAAAGAATAGAGAGGGAAGAAAATTGGAGGCGTGAAGAAAATGAGATATATGAAAGAGAAGCTATTGTGAATGCACGTGAGAGAGATCTTGCTAAACTGAGACAGTGTTCCATTGTTTCCAACATTGAGAAAATAACTGGTCGAAGATTCAATATGTGTGTAACAATGCCTTCTTCTAGTTCTAGCTAG 864 0.3669 MQSPYEMANNSNLYQEQILTIDDGPSSILHTPPNILTSNHIHHSILQHYHYSQSPHNTQQQQQNQGWKEQCHQEYQHFYQSHQYNDPLKFQPQQQQTHSLSNNIVNRYVDCEESTATLSFWKAFNNTVQSDSTEKQQHERCLVSDNNFGELEAVYKYKLGRNHQAAFIEKHDDSKRKARKKRRKKRLKEEMSMMNRFFKRLTKSMVNHQEVLQNKLLEVIERMEKERIEREENWRREENEIYEREAIVNARERDLAKLRQCSIVSNIEKITGRRFNMCVTMPSSSSS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05050 287 Coils Coil 170 190 - -
Trre5g05050 287 PANTHER FI21293P1 57 273 - -
Trre5g05050 287 Coils Coil 213 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05050 Trre-Chr5 51928290 51929468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05050 197 271 Trihelix Transcription Factor Family AT1G76880 38.667 1.24e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05050 - - tpra:123894204 400.593