Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05037 ATGAAAGAATTTTTTCCTTACATCGGTGAGGAACCTAATCAGAAGTTGAGTGCGAATGTGGTGAGGAACCTTAGTAGAAAAACTCATTGGTGCCTCAAAGCTCACGTTGCTATCAGTCGCATCAACATTGACAAGATTAAGAATATCGTAGCTAACATGCTCAAGGTTTTGGTCGAAAATCTTATAGTAGAGCAGAGAGAATTGCAGAATGAGTGTTTTGCATGA 225 0.3911 MKEFFPYIGEEPNQKLSANVVRNLSRKTHWCLKAHVAISRINIDKIKNIVANMLKVLVENLIVEQRELQNECFA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05037 74 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 73 IPR045042 -
Trre5g05037 74 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05037 Trre-Chr5 51850874 51852691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05037 12 73 Mechanosensitive Ion Channel Family AT5G10490 54.839 7.12e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05037 K22047 - mtr:11434686 77.7962