Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05028 ATGACAGATAAAAATCCCATACCACCAAATTCACCAGACACCGATTTCATCAACCAATGGCCTATGGACCTTTCTGAGTACTTGAGATTTGATGATGATGATGATGATCAATGGCCAGATGATGATCCAGAGGCATTTGTTTCTGAACATGTAATCAACCAAGATAATCAACAAGCTAGTGAATTATTAGTAGGTAACTTTGGAGGAAGTGGAAGCCATCTTGAGGGTTCTTCTAGCAGAGGTGTTAGTGTAAGCAATGAAGGTGAGAAGAAGGAAGTTGGAGATAAAGTTGCATTTAAAACAAAGTCAGAGGTTGAAATTCTTGATGATGGCTTCAAGTGGAGGAAATATGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGATGGATGTCAAGTGAAAAAGAGAGTTGAGAGAGATGTGGATGATCCAAGTTATGTTATAACAACCTATGAAGGCACACATACTCATCCAAGTTTTAACTAG 510 0.3902 MTDKNPIPPNSPDTDFINQWPMDLSEYLRFDDDDDDQWPDDDPEAFVSEHVINQDNQQASELLVGNFGGSGSHLEGSSSRGVSVSNEGEKKEVGDKVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDVDDPSYVITTYEGTHTHPSFN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05028 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 166 IPR044810 GO:0003700
Trre5g05028 169 MobiDBLite consensus disorder prediction 66 84 - -
Trre5g05028 169 MobiDBLite consensus disorder prediction 66 95 - -
Trre5g05028 169 SUPERFAMILY WRKY DNA-binding domain 101 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre5g05028 169 Pfam WRKY DNA -binding domain 109 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre5g05028 169 FunFam WRKY transcription factor 57 94 168 - -
Trre5g05028 169 Gene3D WRKY domain 93 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre5g05028 169 ProSiteProfiles WRKY domain profile. 103 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre5g05028 169 SMART WRKY_cls 108 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05028 Trre-Chr5 51813513 51814556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05028 10 169 WRKY Transcription Factor Family AT5G26170 50.000 2.76e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre5g05028 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05028 - - mtr:11431843 268.855