Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05014 ATGGTGTTCATGGATTTGGAATGGTTAATTCCAATTAGTTTCTCTTTTGCTTCAACAATATTGTTTACACTATTGTCTTTAGTAGGAGGATGGTTGATTTATCTATATGAGCCGTATTGGAAGGTAAGGAATGTTCCAGGTCCACCATCACTGCCTTTGGTAGGACACCTTCACTTAATGGCTAAACATGGCCCTGATGTTTTCTCAATCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCATTAATAATTGTAGCAGATGCAGAATTATGTAAAGAGGCTGGAATAAAAAAATTTAAAGACATTCCAAATAGAAGCACTCCCTCTCCCATTAAAGCTTCTCCACTTCACCAAAAGGGCCTCTTCTTCACCAGGGATTCACAATGGTCTACAATGAGAAACACAATTTTGTCTGTATATCAACCATCACACCTATCAAGTTTAGTGCCAACAATGCAATCATTCATAGATTCTGCCACTCAGAATCTTGACTCTCAAGAAGACATTGTGTTTTCTAATTTATCGCTTAAACTTGCGACGGACGTGATTGGACAGGCTGCATTTGGTGTTAATTTTGGCCTCTCTGAACCTCATTCTGTTCGCAATGAAATCGAGAGTGTTAATGTTAATAAGGACGATGTAATGAGTGCAAGTGGTAGTGATGAAGTAACGGATTTCATCAACCAACATATATACTCTACAACTCAACTTAAGATGGATTTGTCCGGTTCATTCTCGATCATACTTGGTCTACTTGTTCCAATTCTTCAGGAACCATTTAGACAGATTTTGAAGCGAATACCGGGAACCATGGACTGGAAAATCGAGCGTACTAACAAAAAACTAGGAGGCCGTCTTGATGAGATCGTAGAGAAGAGAATGAACGATAGAACACGTAGTTCAAAGGATTTCTTGTCGCTTATACTAAATGCTAGAGAATCAAAAGCTGTTTCGGAAAATGTTTTCACACCTGAATATATCAGTGCTGTTACCTATGAACACTTGCTTGCTGGATCAGCTACCACTTCCTTTACTTTGTCTTCTGTTGTCTATTTGGTAGCTGCACATCCAGAAGTTGAGAAAAAGTTGCTTGTAGAGATTGATGGGTTTGGTTCGATAGATCATATACCTACTTCTCAAGACCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCGATGCGGATTTACATTGTATCACCATTAGTAGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTTTGGTTAGCTCTTGGCGTTCTAGCAAAAGATCCGAAAAATTTTCCGGAGCCAGAAAAGTTCAAACCAGAACGGTTTGATCCTAACTGTGAAGAAATGAAACGAAGGCACCCTTATGCTTTCATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCAATACAAGAGATCAAGCTTTCTCTCATCCATTTATACAGAAAATACTTGTTTCGCCATTCACCTAATATGGAAAACCCTTTAGAACTCGAATATGGCATAGTCCTCAACTTCAAGCATGGTGTCAAACTAAGAGCCATAAAAAGGACACCGACGAGCTGCTAA 1629 0.3941 MVFMDLEWLIPISFSFASTILFTLLSLVGGWLIYLYEPYWKVRNVPGPPSLPLVGHLHLMAKHGPDVFSILAKQYGPIYRFHMGRQPLIIVADAELCKEAGIKKFKDIPNRSTPSPIKASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSSLVPTMQSFIDSATQNLDSQEDIVFSNLSLKLATDVIGQAAFGVNFGLSEPHSVRNEIESVNVNKDDVMSASGSDEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKLGGRLDEIVEKRMNDRTRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKLLVEIDGFGSIDHIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSIQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRTPTSC 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05014 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Trre5g05014 542 Pfam Cytochrome P450 46 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 FunFam Cytochrome P450 3A4 32 542 - -
Trre5g05014 542 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 Gene3D Cytochrome P450 33 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 SUPERFAMILY Cytochrome P450 38 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g05014 542 PANTHER THROMBOXANE-A SYNTHASE 18 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05014 Trre-Chr5 51706081 51712654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05014 83 537 Cytochrome P450 AT2G26170 74.561 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05014 K20771 - gmx:100797803 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05014 5 51706081 51712654 Trre5g05014 5 51706081 51712654 ECH
Trre1g00531 1 3947336 3950046 Trre5g05014 5 51706081 51712654 PCT