Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05004 ATGTTTATTCTCGAGGATCTCTGGCAATTACTTCTCCAATTCCTCATTGGAAATTCTCGCTTCTTCTCTGAAAACGAATCGTTCATCAGACTCAGAGAATCATCAACATCGTCATCATCAACAATGGCGAATTCCACATGCGGAGGTGCTGAGTCAGACCTATGTAGAGACGAATCAGCAGCGTTCGTTCTCAAATTCATAGCCATTGCGTCGATTCTTTTTGCAGGAATGGCTGGAATCGCGATTCCATTGATCGGAAAACACCGTCGGTATCTTCGAACCGACGGAAACCTCTTCGTCGCGGCAAAAGCTTTTGCGGCAGGTGTGATTCTAGCAACAGGTTTTGTCCACATGTTATCTGATGCGACGAAAGCGCTTAATAGTCCTTGCTTGCCGGAATTCCCGTGGTCGAAGTTTCCGTTTACTGGTTTTTTTGCTATGGTGGCGGCGCTTTTAACTCTTTTGCTTGATTTCGTTGGAACTCAGTATTATGAACGGAAGCAAGGGTTGAATCGTACGGTGGATGAACAAGCTAGGGTTGGAAGTTCGGAAGAAGGGAATGTGGAATGGAATTCAGGGAAGGTTTTTGGTGAAGAGGAGAGTGGTGGAATGCATATTGTTGGAATGCATGCACATGCGGCACATCATAGACATAATCACCCTCATGGTAATGAAGCATGTGATGGCGCTGGTATAGTCAAGGATCATGGCCATGCTCACTCACACGCACATGCTGTAGATGATGAAGCTGATGTACGACACGTCGTCGTTTCACAGGTGTTGGAGCTTGGGATTGTGTCACATTCGGTGATAATTGGATTGTCTTTGGGAGTTTCACAAAGCCCATGTGCCATAAGACCTCTAATTGCTGCATTATCTTTCCATCAGTTTTTTGAAGGGTTTGCACTTGGAGGGTGCATCTCCCAAGCCCAATTCAAGACCTCATCGGCAACAATAATGGCTTGTTTTTTTGCACTGACTACACCTATTGGTGTTGGCATTGGCACAGGCATTGCTTCAGTTTATAACCCTTACAGTCCTGGTGCACTCATAGCTGAAGGTATATTGGATTCATTGTCAGCAGGGATTTTAGTTTACATGGCTTTAGTTGACTTGATAGCTGCTGATTTTCTTAGCAAAAGAATGAGTTGTAATTTTAGGTTGCAGATAGCATCTTATTGTATGCTTTTCCTTGGAGCTGGGTTAATGTCTTCACTAGCAATATGGGCATGA 1233 0.4436 MFILEDLWQLLLQFLIGNSRFFSENESFIRLRESSTSSSSTMANSTCGGAESDLCRDESAAFVLKFIAIASILFAGMAGIAIPLIGKHRRYLRTDGNLFVAAKAFAAGVILATGFVHMLSDATKALNSPCLPEFPWSKFPFTGFFAMVAALLTLLLDFVGTQYYERKQGLNRTVDEQARVGSSEEGNVEWNSGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGNEACDGAGIVKDHGHAHSHAHAVDDEADVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCAIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPIGVGIGTGIASVYNPYSPGALIAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSSLAIWA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05004 410 PANTHER ZINC/IRON TRANSPORTER 62 403 - -
Trre5g05004 410 Pfam ZIP Zinc transporter 63 407 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g05004 410 NCBIfam ZIP zinc/iron transport family 49 410 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05004 Trre-Chr5 51608402 51610339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g05004 42 410 Inorganic Solute Cotransporters AT1G10970 72.751 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05004 K14709 - gmx:100812212 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00512 1 3836800 3838534 Trre5g05004 5 51608402 51610339 PCT