Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04923 ATGCAATCAAGTAGTAGGCTTTTGTTGTGTTCCTCCAATTCGTTATTTGGGTCACCCTCAGCCGTCACTGCCACACCCCCCTCTTGTCTTAGATTCCCACCAATCTCCCTAACCATCACTAATTCATCCTCGTTTCGCTTCAAACCCCTCTGCTCCACTTCTTCATCGAGTGACTCTCCGCAATATACAGAAATGGCATCAAAGGATTCTAAAGATCAAGACCCGCGTATTGCCGGAATTTCATCTGCGATCCGTATCATCCCTGATTTTCCTAAACCAGGGATTATGTTTCAAGATATAACCACACTGCTTCTCGATACAAAGGCTTTCAAAGATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTTGCAGGTGTTGAAGCAAGAGGCTTTATTTTTGGCCCACCCATTGCGTTGGCGATTGGAGCAAAATTTGTTCCAATGAGGAAACCCAAAAAATTGCCAGGAGAGGTTATCTCAGAAGAGTACTCGTTGGAGTATGGAACTGACAAAATAGAAATGCATGTAGGGGCTGTACAACCTGGTGAAAGAGCCTTAGTCATAGATGATCTTATAGCAACTGGTGGAACCTTATGTGCTGCAATTAAACTACTAGAACGTGTTGGGGTGACTGTTGTTGAGTGCGCTTGTGTGATTGAATTACCGGAGTTAAAGGGGCGAGAAAAGCTGGGCGGCAAGTCTTTGTTCATCTTAGTTGAAGGAGAAGGAGCCTGA 753 0.4409 MQSSSRLLLCSSNSLFGSPSAVTATPPSCLRFPPISLTITNSSSFRFKPLCSTSSSSDSPQYTEMASKDSKDQDPRIAGISSAIRIIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPGERALVIDDLIATGGTLCAAIKLLERVGVTVVECACVIELPELKGREKLGGKSLFILVEGEGA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04923 250 FunFam Adenine phosphoribosyltransferase 1 68 247 - -
Trre5g04923 250 Gene3D - 67 247 IPR029057 -
Trre5g04923 250 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 69 246 - -
Trre5g04923 250 MobiDBLite consensus disorder prediction 52 75 - -
Trre5g04923 250 Pfam Phosphoribosyl transferase domain 106 231 IPR000836 -
Trre5g04923 250 SUPERFAMILY PRTase-like 65 238 IPR029057 -
Trre5g04923 250 CDD PRTases_typeI 114 246 IPR000836 -
Trre5g04923 250 Hamap Adenine phosphoribosyltransferase [apt]. 80 247 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre5g04923 250 NCBIfam adenine phosphoribosyltransferase 81 245 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04923 Trre-Chr5 50919229 50922090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04923 65 246 PRT Gene Family AT1G27450 84.066 4.71e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04923 K00759 - gmx:100305792 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04923 5 50919229 50922090 Trre5g04923 5 50919229 50922090 ECH