Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04915 ATGAATATTCTGATTTTCAAGTGTCTTCAGATGGTTTTGCTGCTAGTTTTCTCTAGCAGATACACTATAGCAGAAAAGAAAACACAGAATCCTAAAAGAACATACATAATTCACATGGACAAGTTCAACATGCCAGCAAGTTTCGATGATCATCTCCAATGGTATGATTCATCACTAAAATCTGTATCAGAAACTGCAGAGATGCTGTATACCTACAAACATGTAGCTCATGGCTTCTCCACAAGGCTAACTACTCAAGAAGCAGACTTACTCACAAAGCAACCGGGAATTCTCTCGGTTATCCCTGAAGTTAGATATGAGCTTCACACAACTCGAACACCAGAGTTCCTTGGATTAGAGAAAACAAAAACTCTTCTAGGGTCCTATGGAAAACAAAGTGACGTGATTGTTGGAGTTATTGACACTGGTGTATGGCCTGAACTAAAAAGCTTCGACGACACTGGACTTGGACCAGTACCCAGTAGCTGGAAAGGGGAATGTGAGACAGGTAAAACCTTTAACTTATCAAACTGTAACAGAAAACTTGTTGGTGCAAGGTTTTTTGCGAAAGGCTATGAGGCGGCTTTTGGACCCATTGACGAAAAGGCAGAATCGAAGTCACCTAGGGATGATGATGGGCATGGAAGTCACACCTCAACTACAGCAGCAGGTTCTGCAGTTGCAGGAGCAAGCCTCTTTGGTTTTGCTTCTGGGACAGCAAAAGGAATGGCCACACAAGCTAGAGTGGCCGCTTACAAAGTGTGTTGGCTTGGTGGGTGCTTTACAACAGACATAGCTGCTGCAATTGACAAGGCCATTGAAGACGGTGTCAACATCCTCTCTATGTCTATTGGTGGAGGTTTAATGGACTACTACAAAGACACTGTTGCAATGGGAACTTTTGCAGCCATAGAACATGGAATACTAGTATCCAGTTCAGCAGGAAATGGTGGACCTAGTCGAGCAACTTTGGCTAATGTTGCGCCATGGATAACCACTGTAGGTGCTGGAACTATAGACCGTGATTTCCCTGCTTATATCACCCTTGGAAACGGGAAGAGATACAACGGCGTGTCTCTTTACAATGGAAAATTACCACCTGATTCTCCAGTGCCACTTGTTTATGCTGCTAATGTCGGCCAGGATTCGACCGATGGCCTGTGCACCGAAGATAGTTTGATTCCTGGTAAAGTTTCAGGAAAAATAGTGATATGTGACCGAGGAGGAAATCCTAGAGCCGAAAAGAGTTTGGTGGTCAAGCGTGCAGGAGGAATTGGGATGATTTTAGCAAACAAAGAAGATTATGGGGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCTGCAGCAGCTTTGGGAGAGAAAGCAAGCAATGAAGTAAAAAAGTATGTTTCTTCTGCTCCCAATCCAACTGCTAAAATTGCATTCGGCGGTACCCAATTAGGGGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCTAGAGGACCAAATATACTTACTCCGAAAATACTCAAACCGGACCTTATAGCTCCAGGAGTCAACATTCTAGCTGGATGGTCAGGGAAAGTTGGACCAACTGGCTTGGCTGATGACACAAGGCATGTGAGCTTCAACATCATCTCTGGCACATCCATGTCATGTCCTCATGTAAGTGGCTTAGCTGCTCTTCTTAAAGGAGCTCATCCAGAATGGAGTCCCGCAGTTATAAGGTCTGCCCTCATGACCACATCTTACAGAGCCTACAAAAATGGGCAAACCATAAAAGATGTCGCTACTGGGATACCTGCCACACCGTTTGATTATGGTGCTGGGCATGTGGATCCAGTAGCTGCTCTTGATCCCGGTCTTGTGTATGACACTACCGCGGATGACTACTTGAGCTTCCTCTGCGCCTTGAACTACACTTCATCTCAAATAAAGCTTGTTGCAAGAAGACAGTTTACCTGTGACAAAAGGATTAAATACAGGGTGGAAGATCTCAATTACCCATCTTTTGCAGTTGACACAGCATCGGGCGTAAGGGGTGGTTCTCACAAATCAACTACTGTCCAATACAAGAGGATTTTAACTAACGTAGGGACCCCCGCAACTTACAAAGTTTCAGTGTCATCACAGTCTCCTTCGGTTAAGATTACAGTTGAACCACAAATACTTAGTTTCAAGGGGCTGAATGAGAAGAAGAGCTACACTGTTACATTCACATCTAATTCAATGCCTTCTGGTACAACCAGCTTTGCTCATCTGGAATGGTCGGATGGGAAACATAAGGTCACCAGTCCTATTGCTTTCAGCTGGACTTGA 2301 0.4463 MNILIFKCLQMVLLLVFSSRYTIAEKKTQNPKRTYIIHMDKFNMPASFDDHLQWYDSSLKSVSETAEMLYTYKHVAHGFSTRLTTQEADLLTKQPGILSVIPEVRYELHTTRTPEFLGLEKTKTLLGSYGKQSDVIVGVIDTGVWPELKSFDDTGLGPVPSSWKGECETGKTFNLSNCNRKLVGARFFAKGYEAAFGPIDEKAESKSPRDDDGHGSHTSTTAAGSAVAGASLFGFASGTAKGMATQARVAAYKVCWLGGCFTTDIAAAIDKAIEDGVNILSMSIGGGLMDYYKDTVAMGTFAAIEHGILVSSSAGNGGPSRATLANVAPWITTVGAGTIDRDFPAYITLGNGKRYNGVSLYNGKLPPDSPVPLVYAANVGQDSTDGLCTEDSLIPGKVSGKIVICDRGGNPRAEKSLVVKRAGGIGMILANKEDYGEELVADSYLLPAAALGEKASNEVKKYVSSAPNPTAKIAFGGTQLGVQPSPVVAAFSSRGPNILTPKILKPDLIAPGVNILAGWSGKVGPTGLADDTRHVSFNIISGTSMSCPHVSGLAALLKGAHPEWSPAVIRSALMTTSYRAYKNGQTIKDVATGIPATPFDYGAGHVDPVAALDPGLVYDTTADDYLSFLCALNYTSSQIKLVARRQFTCDKRIKYRVEDLNYPSFAVDTASGVRGGSHKSTTVQYKRILTNVGTPATYKVSVSSQSPSVKITVEPQILSFKGLNEKKSYTVTFTSNSMPSGTTSFAHLEWSDGKHKVTSPIAFSWT 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04915 766 CDD Peptidases_S8_3 106 578 IPR034197 -
Trre5g04915 766 Gene3D - 629 765 - -
Trre5g04915 766 Gene3D - 340 481 - -
Trre5g04915 766 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Trre5g04915 766 ProSiteProfiles Serine proteases, subtilase domain profile. 105 612 - -
Trre5g04915 766 FunFam Subtilisin-like protease SBT1.5 134 351 - -
Trre5g04915 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Trre5g04915 766 Pfam Subtilase family 133 603 IPR000209 GO:0006508|GO:0008236
Trre5g04915 766 Gene3D Peptidase S8/S53 domain 134 625 IPR036852 GO:0004252|GO:0006508
Trre5g04915 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Trre5g04915 766 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Trre5g04915 766 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre5g04915 766 Pfam PA domain 372 456 IPR003137 -
Trre5g04915 766 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Trre5g04915 766 CDD PA_subtilisin_like 346 473 - -
Trre5g04915 766 MobiDBLite consensus disorder prediction 200 216 - -
Trre5g04915 766 MobiDBLite consensus disorder prediction 200 221 - -
Trre5g04915 766 FunFam Subtilisin-like protease SBT1.5 629 766 - -
Trre5g04915 766 Pfam Fibronectin type-III domain 659 762 IPR041469 -
Trre5g04915 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Trre5g04915 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 762 IPR045051 -
Trre5g04915 766 FunFam subtilisin-like protease SBT1.5 340 480 - -
Trre5g04915 766 SUPERFAMILY PA domain 370 436 IPR046450 -
Trre5g04915 766 FunFam Subtilisin-like protease SBT1.9 23 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04915 Trre-Chr5 50877264 50879564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04915 34 766 Subtilisin-like Serine Gene Family AT5G67360 65.850 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04915 - - gmx:100794284 1253.43