Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04914 ATGAAGGAACAAGAGTTATGCGAGGCGGCGATTAAGGGTGACACGGACAAGGTAACAGCTCTTATCGACTCCGGCGCCGACGTTACTCATTTCGACGCCGATGGTCTCACTCCTCTTATGCATGCCGCAAAGCACGGCCATGCACCCATCCTCGACATCCTTCTCACCGCCGGTGCTCCTTGGAACGCTCTTTCTCCCTCCAACCTCTCCGCCGGTGATTTCGCAATGCAAGAAGGTCACCAAGAAGCCTACGAGCTTCTCCTCAATGCCGGGATTCGATCTGAATTAGTATTGGGAACAATTGCTAGAAAGGAAAAGAAAAATCTTGATTCTGGTTATGATTATTTGGAAGATAGGGTTAGTTTTAGTGAAGATAAAATTATGGATGCTGATAGTAAAGCTGTGATGATGGCATGGGAGAAGCCATTGATGGAAGCTCATGCTAAAGCTGTTTGTTTAGGAGGTGGTCATGTTCTTAATATTGGATTTGGAATGGGTCTTGTTGATACTGCTATACAACAATATTCACCTGTTAAACATACTATTGTTGAGGCTCATCCTGAGGTTTATGAACGAATGATTCGAACCGGTTGGGGTCAGAAGGAAAATGTTAAGATCGTTTTTGGTCGTTGGCAAGATGTCCTATCTCAGCTTGAAACATATGATGGGATATTCTTCGACACCTATGGGGAGTACTATGAAGACCTAAGAGAGTTCCACCAACATCTCCCGGTTTTGTTGAAGCCTGGTGGAGTATACTCTTTCTTCAATGGCCTTTGTGGTAGTAATGCATTTTTCCATGTTGTGTACTGCCACTTAGTATCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCATTGCCTGTTAAGGATTGTTTGGGGGAACAAGTTTGGGAAGGTGTTAAACACAGATACTGGCAACTTGATACATACTACCTTCCTGTTTGTCAGTCTGCAGAGGACTCTGAATGA 981 0.4404 MKEQELCEAAIKGDTDKVTALIDSGADVTHFDADGLTPLMHAAKHGHAPILDILLTAGAPWNALSPSNLSAGDFAMQEGHQEAYELLLNAGIRSELVLGTIARKEKKNLDSGYDYLEDRVSFSEDKIMDADSKAVMMAWEKPLMEAHAKAVCLGGGHVLNIGFGMGLVDTAIQQYSPVKHTIVEAHPEVYERMIRTGWGQKENVKIVFGRWQDVLSQLETYDGIFFDTYGEYYEDLREFHQHLPVLLKPGGVYSFFNGLCGSNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEQVWEGVKHRYWQLDTYYLPVCQSAEDSE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04914 326 ProSiteProfiles Ankyrin repeat region circular profile. 34 59 - -
Trre5g04914 326 Gene3D - 1 105 IPR036770 -
Trre5g04914 326 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 24 321 - -
Trre5g04914 326 PIRSF Rmt2 102 323 IPR017408 GO:0016274
Trre5g04914 326 PIRSF Rmt2 1 114 IPR017408 GO:0016274
Trre5g04914 326 FunFam Protein arginine N-methyltransferase 2 1 99 - -
Trre5g04914 326 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 106 326 IPR026480 -
Trre5g04914 326 SMART ANK_2a 34 63 IPR002110 GO:0005515
Trre5g04914 326 SMART ANK_2a 1 30 IPR002110 GO:0005515
Trre5g04914 326 SUPERFAMILY Ankyrin repeat 6 94 IPR036770 -
Trre5g04914 326 Pfam Ankyrin repeats (3 copies) 6 92 IPR002110 GO:0005515
Trre5g04914 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 319 IPR029063 -
Trre5g04914 326 Gene3D Vaccinia Virus protein VP39 106 321 IPR029063 -
Trre5g04914 326 ProSiteProfiles Ankyrin repeat profile. 34 66 IPR002110 GO:0005515
Trre5g04914 326 FunFam Arginine N-methyltransferase 2 102 321 - -
Trre5g04914 326 CDD AdoMet_MTases 158 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04914 Trre-Chr5 50874170 50875830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04914 5 93 MAP Kinase Kinase Kinase AT2G31800 32.584 7.87e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04914 K18477 - gmx:100527621 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04914 5 50874170 50875830 Trre5g04914 5 50874170 50875830 ECH