Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04912 ATGGCAAATCAAAAGGTTTTCACTCTCTCACAAATCTCCCAACACAAGTCCAACAAAAACTGTTGGATTGTAATCAACGGCAGAGTGTTGGACGTGACAAAGTTTTTGGAGGAACATCCAGGAGGAGAAGAAGTAATTCTAGAGGTTGCAGGGAAAGATGCCACAAAGGAGTTTGATGATATTGGACATAGTAAAGCAGCTCAAAATTTAGTCCTCAAATACCAAGTTGGTGTACTTGAAGGTGCCAAAAAGATTGATGATATGGATTTTGTTGAGGACAAGGAATCCAAGAGCAAAGAAATGAGTGCTTTTGTTATCAAAGAAGATACTAGTTCCAAAACTGCAACATTTATAGAGTTGTTTGTGCCATTTCTTTTTGCTTTTATCTATTTTGGTTACAGTGTCATCACCAGAGCAGACACTGTTGGTTACTAA 435 0.3793 MANQKVFTLSQISQHKSNKNCWIVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFDDIGHSKAAQNLVLKYQVGVLEGAKKIDDMDFVEDKESKSKEMSAFVIKEDTSSKTATFIELFVPFLFAFIYFGYSVITRADTVGY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04912 144 PANTHER CYTOCHROME B5 3 126 - -
Trre5g04912 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Trre5g04912 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Trre5g04912 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Trre5g04912 144 SMART Cyt_b5_2 7 80 IPR001199 -
Trre5g04912 144 Gene3D - 1 85 IPR036400 -
Trre5g04912 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 84 IPR036400 -
Trre5g04912 144 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Trre5g04912 144 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Trre5g04912 144 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Trre5g04912 144 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Trre5g04912 144 FunFam Cytochrome b5 type B 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04912 Trre-Chr5 50861042 50861910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04912 2 138 NADPH P450 reductases AT5G48810 43.262 1.13e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04912 - - mtr:112420340 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04912 5 50861042 50861910 Trre5g04912 5 50861042 50861910 ECH