Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04810 ATGGTCCTTGATTGTTGTCGTGGCATGTCAGCGGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCATGCAAAGGGACTTAGAGATGACACAACCTGCATTGTGGTCGATATTTTACCCCAGGAGAAGCCACCTACTTCTCTACCAACACAAAAGAGACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGCAAAAAGTCCTCTGAGCCATCTTCATATATTGTAAGAGAATACGTTGAGCCAGATATGGTACGGGAATTACACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTTGAAACAAAATTTCCACTTTGCAACATGTTCAAGTTGTTCCAGTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAGGGTGCCCCTAACCAAGGGAAAGCGCGCCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCACGAGAAGAAACAAGCCATGGAAGGGAGACGAACATCAGATAGACATAGCCGTCGAAGTGACTAA 522 0.4559 MVLDCCRGMSAEAAAPHIVKESLHAKGLRDDTTCIVVDILPQEKPPTSLPTQKRPVKGMLKAIFRKKSSEPSSYIVREYVEPDMVRELHEEGSAMLSERFETKFPLCNMFKLFQCAVCQVEIKPGEGISVHEGAPNQGKARPWDGPFLCSSCHEKKQAMEGRRTSDRHSRRSD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04810 173 MobiDBLite consensus disorder prediction 155 173 - -
Trre5g04810 173 MobiDBLite consensus disorder prediction 154 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04810 Trre-Chr5 49950075 49950886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04810 3 173 PP2C-type Phosphatase Gene Family AT1G47380 67.442 9.07e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04810 - - tpra:123914399 317.39