Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04802 ATGAACAAGGCACGCTTTGGGTTGTTCTTCATTTTGTTTATTCTCCTTGCTTGTCGGATGGTTATATTAACTGATGGAAGGAAGTGTGAGTCAAAGAGACGTTGGATTAAAGGGAATTGTTTGAGTGATGAAAAATGTGCTGCGGATTGTCTTGTTAAAGGTTTTCTATTTGGTAAATGCAGGGGAGTTGATAATCGCTGCTACTGCAAAAAACCACGTTGTTAA 225 0.3867 MNKARFGLFFILFILLACRMVILTDGRKCESKRRWIKGNCLSDEKCAADCLVKGFLFGKCRGVDNRCYCKKPRC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04802 74 SUPERFAMILY Scorpion toxin-like 27 71 IPR036574 -
Trre5g04802 74 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Trre5g04802 74 Gene3D - 27 74 IPR036574 -
Trre5g04802 74 Pfam Gamma-thionin family 28 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04802 Trre-Chr5 49859552 49860407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04802 1 71 Plant Defensins Gene Families AT5G63660 38.028 1.51e-13 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04802 - - gmx:100788332 77.7962