Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04799 ATGATGAACAAGGCACACTTTGGTCTTTTCTTCACTTTGTTTATTCTCCTTGCTTCTCAGTTGATGGTACAAACTGAGGGAAGGCGTCATGGGTCGAGGAGTAGCCGGTTTGAAGGAGTGTGTTTGAGCAATCATAGATGCACTTCAGTTTGTCGTGATGAAGGCTTTGAATGTGGCGAATGCAAGAGATTTCGTAAAGGTTGCTTCTGCTACAACCATTGTTAA 225 0.4311 MMNKAHFGLFFTLFILLASQLMVQTEGRRHGSRSSRFEGVCLSNHRCTSVCRDEGFECGECKRFRKGCFCYNHC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04799 74 PANTHER DEFENSIN-LIKE PROTEIN 1 4 72 - -
Trre5g04799 74 SUPERFAMILY Scorpion toxin-like 32 74 IPR036574 -
Trre5g04799 74 Gene3D - 29 74 IPR036574 -
Trre5g04799 74 Pfam Gamma-thionin family 32 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04799 Trre-Chr5 49812054 49813868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04799 2 74 Plant Defensins Gene Families AT5G63660 42.466 1.35e-14 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04799 - K19330 pvu:PHAVU_009G158100g 98.9821