Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04790 ATGGCCTCTTCTTCTAGTTCCTACCAATTGCAAACTACTTATCTCAAAAGCACCGAAGAATTTAATTGTTTCAAAGAAAATAAAGTATCGAAAGCTCTTCAAGAAGAAGAAGAAGAAGATTGGCTAAGGTTAGGGTTAACATCATCATGGAAGAAGATAGTAGATCAAAATCACATACCAAATCCAACTTTAGTTTCTTCATCATCATCATCATCTTCATCGTCATCATTTTTATCATCTTCTTCTCAATCACTATTTTGCCCTCAAATAGGATTAGGGTTAGGGTTTGAAGATAAGGGATCATGTTTAGAATCAAGAAAAAGTAAAGAGGGATTAGAAGGCCTAAATTGGTATGATGACCATAATCATAATCATAATCATGATAATGGCATGATGTTATGGCCATCATCAACATCATGTCAAATTATGAATCCTCGTGGTGAAGAATTGGCTATGTCGATTCCAAGTGATTCTCATCATTACTTGGCCAGAAATAATCACAACCAATCTGATTTGTGGTTTACACTTCGCTCCTTTACCAACCGGAGTGGTGAAGCTTTGCCTCAAATATCAAAGGAATACATAAGAGTAAAGGATGAAAACATGACGGTGTTGATGGTTAAAAAGTATCTGGTTACAAAACTTGGTCTCTCCAACGAAGCTGAGGTAACCTAG 675 0.36 MASSSSSYQLQTTYLKSTEEFNCFKENKVSKALQEEEEEDWLRLGLTSSWKKIVDQNHIPNPTLVSSSSSSSSSSSFLSSSSQSLFCPQIGLGLGFEDKGSCLESRKSKEGLEGLNWYDDHNHNHNHDNGMMLWPSSTSCQIMNPRGEELAMSIPSDSHHYLARNNHNQSDLWFTLRSFTNRSGEALPQISKEYIRVKDENMTVLMVKKYLVTKLGLSNEAEVT 224
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04790 224 PANTHER RING FINGER PROTEIN 21 223 IPR044171 GO:0007275
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre5g04790 Trre-Chr5 49733524 49735416 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04790 187 223 C3H Transcription Factor Family AT3G23060 59.459 5.11e-06 44.7