Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04740 ATGGCTGGGCTAATTTTAGGACCAATGGTGCCGGTATTCGAGGACTACAAGAGGATGTTGTTTCCTTATGGAAGTCAAGATACACTTGCATCAATAACAGCACTTGGTTATGTGTTTTTTCTATTTGAAACTGGTATTAAAATGGATTTTCATACGATCATGAAAACAGGAAAAAAAGCATGGGTGATTACGTTTTTCGGGTTAGTAGCCCCTATAATAACTGGTTTTGTTACTCGAAATGTAAGGGCTATGAATGCTTTTAATAACAGTCCCCTTGAAGCAAATATAGTAATGATAGGACACAATACAACTTCATTCGCCGTGATTGTTGCTCTCTTAAATGACCTTAAGCTTCTAAACTCCGAACTTGGACGATTAGCATTATCTGTTTCCTTGATTGGTGACCTATTGAGTAACATTGTTGTAACTTTGTCCTCAACTTTGGTGACTTTGAATAGTCATATTTCATTTGGCACGAGATTAGGATCTTTAATCGGCATAGCTATCTTCGTTTTGTTCATCTATCGTCCCGCAATGCTTTGGATTGTTCAACACACTCCTGAAGGAAAAGAAGTTAAGGATATTTACGTCAACATTGTTATCGGGATTCTGTTTGGTTTGTGTTGGTTTTCTGGATACCTAGAAAGAGGACCTGTCTTTTTACCTTTTATTTTCGGATTGGCTACACCCGAAGGACCTCCATTAGGATCTACATTGATTAAAAGAATTCATTTGTTAGGCATAAAATTGTTTTTGCCAATTTTTATGACTACTACTACAATGAAAGTAGAATATGGCTTCTGGAATAAATCATCTGCGTCAACATTTGATATATTTTTGTATGTTTTTTTTATCGGTTATTTCGCCAAAATGGTAGCATGTTTTATATGCTCACTCTCTTTCAACATACCTCCAAAGGATGCTATCTCTCTTTCCCTACTTTTGAACTGCAAAGGCGTTGTCGAAGTAACCATGTACGCTACCGCATTGGATAGAAATGATATCCTTTCACAAACATATTGTGTGATTATACTGATAATCATGGTTTCAATTTGCATAACTCACTTGCTGGTAAAACGTTTGTATGATCCTTCAAGAAAATATGCTGGCTACCAAAAGAGGAACTTACTCAATTTGAAAAACAACTCAGAATTGAAGATACTAGTTGTCATTCATAAACAACACCATGTAACTCCTATCACTGGAGTAATTGATCTATGTCACCCTATACCCGAAAATCCTATCATCGTAGACGCGTTGCATTTAATCGAGTTAGCTGGAAGATCCTCACCTATTTTCATTTCTCACAAGAAGAAGAAAGTTGTTGCTTTAAACTTGCATGACTCTTATTCTGATAATGTTGTTCTTAATCTCAAACTATATGAACATGATAAACAAGGCGGAGCAATAATAAACCCTTACACTGCTATATCTCCACTTAATTTAATGCATGAAGATGTTTGTCACTTAGCATTTGACAAACTTTCATCAATTATAATCCTTCCTTTTCATAAAAAATGGTTTAGTGATGGTAAGCTTGAATATGATGACAAGAACATTAGGGCTTTAAACTGCTCAGTCTTGGAAAAATCTCCATGCTCAGTTGGAATCCTAGTGACTCGCGGTATTCGTCAAATGGATTCATTATTTCGATTAGCTTTGGTATTTTTAGGTGGAAAAGATGATAGAGAGGCATTATGTTTGGCGAATCGGGCAGCACGAGACCCTAGCGTCGAGCTTGTGATATATCACATTGTAGCCAAGAATAGAACTTTACAGGACATGGAAAATATGGAGACAAGGTTTGATATAGCAATGTTAAAAGATGGTAAAATAGAACACTCTAGATTGGGAAATGTAGCATATAGAGAAATTGAAGTGGAGGGTGGATCACAAACAATTGATGTTCTTAGACAAATGGTACAAGAACATGATTTTATTATAGTTGGAAGAAGAAATGGAATCAAATCTCCACAGACATCTGGGCTTCAAGAATGGAGTGAGTTTCCTGAGTTAGGTCCTGTTGGAGATTTTTTGGCTTCCTCTGATCTTGATTGCAAAGCATCTATTTTAGTAGTTCAACAACAAATATGCATGTAG 2100 0.3614 MAGLILGPMVPVFEDYKRMLFPYGSQDTLASITALGYVFFLFETGIKMDFHTIMKTGKKAWVITFFGLVAPIITGFVTRNVRAMNAFNNSPLEANIVMIGHNTTSFAVIVALLNDLKLLNSELGRLALSVSLIGDLLSNIVVTLSSTLVTLNSHISFGTRLGSLIGIAIFVLFIYRPAMLWIVQHTPEGKEVKDIYVNIVIGILFGLCWFSGYLERGPVFLPFIFGLATPEGPPLGSTLIKRIHLLGIKLFLPIFMTTTTMKVEYGFWNKSSASTFDIFLYVFFIGYFAKMVACFICSLSFNIPPKDAISLSLLLNCKGVVEVTMYATALDRNDILSQTYCVIILIIMVSICITHLLVKRLYDPSRKYAGYQKRNLLNLKNNSELKILVVIHKQHHVTPITGVIDLCHPIPENPIIVDALHLIELAGRSSPIFISHKKKKVVALNLHDSYSDNVVLNLKLYEHDKQGGAIINPYTAISPLNLMHEDVCHLAFDKLSSIIILPFHKKWFSDGKLEYDDKNIRALNCSVLEKSPCSVGILVTRGIRQMDSLFRLALVFLGGKDDREALCLANRAARDPSVELVIYHIVAKNRTLQDMENMETRFDIAMLKDGKIEHSRLGNVAYREIEVEGGSQTIDVLRQMVQEHDFIIVGRRNGIKSPQTSGLQEWSEFPELGPVGDFLASSDLDCKASILVVQQQICM 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04740 699 Gene3D - 1 369 IPR038770 -
Trre5g04740 699 Pfam Sodium/hydrogen exchanger family 1 357 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g04740 699 PANTHER CATION/H + ANTIPORTER 2 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04740 Trre-Chr5 49276452 49279080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04740 14 699 Antiporter Super Family AT5G22900 34.877 2.53e-138 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04740 K26731 - gmx:100784321 777.319