Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04739 ATGATGGCTGGGCTAATTTTAGGACCAATGGTGCCGGTATTCGAGGACTACAAGAGGATGTTGTTTCCTTATGGAAGTCAAGATACACTTGCATCAATAACAGCACTTGGTTATGTGTTTTTTCTATTTGAAACTGGTATTAAAATGGATTTTCATACGATCATGAAAACAGGAAAAAAAGCATGGGTGATTACGTTTTTCGGGTTAGTAGCCCCTATAATAACTGGTTTTGTTACTCGAAATGTAAGGGCTATGAATGCTTTTAATAACAGTCCCCTTGAAGCAAATATAGTAATGATAGGACACAATACAACTTCATTCGCCGTGATTGTTGCTCTCTTAAATGACCTTAAGCTTCTAAACTCCGAACTTGGACGATTAGCATTATCTGTTTCCTTGATTGGTGACCTATTGAGTAACATTGTTGTAACTTTGTCCTCAACTTTGGTGACTTTGAATAGTCATATTTCATTTGGCACGAGATTAGGATCTTTAATCGGCATAGCTATCTTCGTTTTGTTCATCTATCGTCCCGCAATGCTTTGGATTGTTCAACACACTCCTGAAGGAAAAGAAGTTAAGGATATTTACGTCAACATTGTTATCGGGATTCTGTTTGCATGTTTTATATGCTCACTCTCTTTCAACATACCTCCAAAGGATGCTATCTCTCTTTCCCTACTTTTGAACTGCAAAGGCGTTGTCGAAGTAACCATGTACGCTACCGCATTGGATAGAAATGATATCCTTTCACAAACATATTGTGTGATTATACTGATAATCATGGTTTCAATTTGCATAACTCACTTGCTGGTAAAACGTTTGTATGATCCTTCAAGAAAATATGCTGGCTACCAAAAGAGGAACTTACTCAATTTGAAAAACAACTCAGAATTGAAGATACTAGTTGTCATTCATAAACAACACCATGTAACTCCTATCACTGGAGTAATTGATCTATGTCACCCTATACCCGAAAATCCTATCATCGTAGACGCGTTGCATTTAATCGAGTTAGCTGGAAGATCCTCACCTATTTTCATTTCTCACAAGAAGAAGAAAGTTGTTGCTTTAAACTTGCATGACTCTTATTCTGATAATGTTGTTCTTAATCTCAAACTATATGAACATGATAAACAAGGCGGAGCAATAATAAACCCTTACACTGCTATATCTCCACTTAATTTAATGCATGAAGATGTTTGTCACTTAGCATTTGACAAACTTTCATCAATTATAATCCTTCCTTTTCATAAAAAATGGTTTAGTGATGGTAAGCTTGAATATGATGACAAGAACATTAGGGCTTTAAACTGCTCAGTCTTGGAAAAATCTCCATGCTCAGTTGGAATCCTAGTGACTCGCGGTATTCGTCAAATGGATTCATTATTTCGATTAGCTTTGGTATTTTTAGGTGGAAAAGATGATAGAGAGGCATTATGTTTGGCGAATCGGGCAGCACGAGACCCTAGCGTCGAGCTTGTGATATATCACATTGTAGCCAAGAATAGAACTTTACAGGACATGGAAAATATGGAGACAAGGTTTGATATAGCAATGTTAAAAGATGGTAAAATAGAACACTCTAGATTGGGAAATGTAGCATATAGAGAAATTGAAGTGGAGGGTGGATCACAAACAATTGATGTTCTTAGACAAATGGTACAAGAACATGATTTTATTATAGTTGGAAGAAGAAATGGAATCAAATCTCCACAGACATCTGGGCTTCAAGAATGGAGTGAGTTTCCTGAGTTAGGTCCTGTTGGAGATTTTTTGGCTTCCTCTGATCTTGATTGCAAAGCATCTATTTTAGTAGTTCAACAACAAATATGCATGTAG 1842 0.3659 MMAGLILGPMVPVFEDYKRMLFPYGSQDTLASITALGYVFFLFETGIKMDFHTIMKTGKKAWVITFFGLVAPIITGFVTRNVRAMNAFNNSPLEANIVMIGHNTTSFAVIVALLNDLKLLNSELGRLALSVSLIGDLLSNIVVTLSSTLVTLNSHISFGTRLGSLIGIAIFVLFIYRPAMLWIVQHTPEGKEVKDIYVNIVIGILFACFICSLSFNIPPKDAISLSLLLNCKGVVEVTMYATALDRNDILSQTYCVIILIIMVSICITHLLVKRLYDPSRKYAGYQKRNLLNLKNNSELKILVVIHKQHHVTPITGVIDLCHPIPENPIIVDALHLIELAGRSSPIFISHKKKKVVALNLHDSYSDNVVLNLKLYEHDKQGGAIINPYTAISPLNLMHEDVCHLAFDKLSSIIILPFHKKWFSDGKLEYDDKNIRALNCSVLEKSPCSVGILVTRGIRQMDSLFRLALVFLGGKDDREALCLANRAARDPSVELVIYHIVAKNRTLQDMENMETRFDIAMLKDGKIEHSRLGNVAYREIEVEGGSQTIDVLRQMVQEHDFIIVGRRNGIKSPQTSGLQEWSEFPELGPVGDFLASSDLDCKASILVVQQQICM 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04739 613 Gene3D - 1 210 IPR038770 -
Trre5g04739 613 Pfam Sodium/hydrogen exchanger family 1 212 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g04739 613 PANTHER CATION/H + ANTIPORTER 206 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04739 Trre-Chr5 49276449 49279080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04739 199 613 Antiporter Super Family AT5G22900 38.194 1.10e-97 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04739 K26731 - gmx:100784321 508.064