Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04735 ATGACAAAAAACCAACAACACCTTCTAACACCAACACCAATCATTAACCAAAACCAGTTTGAATTGCAGGGTAAAGAGCAGTTAGAGTCTGAGGGATCATCACCTCTCACGGTTACTTCCCGGGTTTTGTATATGTTAGGAGATATCACTGCAGGGCCTGCACTTATGTTCACTCAATGGCTTCAATCTGTTCGTAAACGCGCTTCCAATCATCGCTCCTCTGGATTCCCTCGCTCTTCTTCCACCATCACACCCTTTTGTTTTGGAGAATATGCGGAGGATGCAAAAATTGATGAGATGCCTGATCAAACTGAAATTAGTTTGTGGGATAGGCTTGGTAAAGCTGAGATGTTGGACATTGAATCAAGTTCCTTTTCTTGGGATATGCTCTCTTCACTTCACCACACTGAGCATACTAGTAGCAATGAGCATTCCGAGGATGAAACAAATAAAGCTCTCGAGCTTACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATTTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCCGAACGACTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTGTGAGCGTGATGCAATTGGTGAAACAACATGTTCAGAACTTTTGGAAGCACTTGAGCTTAGCCGGTGTCTCTTGTTTATGAGTTATGTACATGGTTCACCTTTGCTTGAAAGTTGTCACACATTTGAATCACGGGATTCTGCAGAAACAGTATCAGCAGCCCTTGGCAGGGTAATAATGCTAGATCTTGTTATCAGAAATGAAGATAGGCTTCCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGACAAGACAATCTCTTCAAATTTAGATACAATAGGAGAAGCCTTTGATTTTGACATAAATCGATATGGGCCCGTGGTGGCTGGGACGCTTCAGAAAGAAAGAAGGTCAACTTCAGTAGTTGGCAGATCGAGTTCTCAAAATCATGGAATAAGATCACAAGTCTCTCTTCTTTCACAGATAAGTGAATCATCTGATGACATGTGCCTTAAAAGTCAAACGTCAGGAGAATCATTGTTTACTGGCTCCAAGATTGTGGCTATTGACTCCGTTGTTCCTCGTCGACCCCCTGCAGGAAAACGTGCAGATGATCAGGTCAATTATCCTAAGTTGGTTGAGTTAGTACTAAATAGCTCTGAATTTTCCTCTTGCTTGTTATATGATATAACTGGAGGGAAATTAGGAAGTCCCCCCTTAGAAGACATAAATACAACAGTCGATGTACAAGGGAGTGAAGTAACATCAGTAGTTCACGAGTTCCGCAGTGGTTTTCGTGCTGCTCTTAGGGATCTTCAAGGATTTCATATATTCCTACTTACACTTCACAAAAAACTTGATAATGTGTTACGATCATTTAATAATACTATAAGCAAAATACCACTGGGGGACTCTGAAAAAGAAGATTCACCTTCACCCGCTACTGGTAGTTGTCTCTCTCCAACAAGTAAGGAAAGATGTTCTAATGATAGCCATCGAGATTTGAGTGATACAGATTCACAGAGATCTGCTCCAAGGGCATCACCATCTTCATGCAATAGAGATTTTTGTGATTCTGCTTCTCCCATGTCAAGAGAAGGTTGGCATGGAAAATCCTCTAAAGGAAGCGTAGAGCCATTGCTTGGTTCCCGTTTTACAGCTAAGCTCCGTGATTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACATTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTTTGCCAGGAGAATAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAAAGACCATCTGCTGTTACAAGTAATTTGTTCATCGGTGGAGCACAATCTGCAAGATCTGTATACACAATGCAACACATGGGAATCACTCATATTTTGTGCTTGTGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCTGATCTGTTCACTTACAAAAATTTCTCTGTGTGTGATACTGAGAATTCTGACATCGGCGTATTATTTGACGAAGCTTGTGATTTTATAGAAGATGTTGAGAAAGGAGGTCAGAGAGTTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGTGTCACTGTGCTCCTTGCTTACTTGATGCTCAGAAAGAACTTCACATTATTAGAAGCATGGAATGCTATGAGAAAAGTTCACCGTCGAGCGCAGCCTAATGATGGTTTTGCAAAGATCTTACAAGAACTTGATCATAAACTGCATGGGAAAGTTTCGATGGAGTGGCAGCGGCGGAAACCAACAATGAAAGTTTGTCCGATATGTGGCAAGAATGCTGGACTGAGTAGCAGCTCACTTAAGCTACATCTTCAGAAATCTCATAAAAGACTATCATCAGGGAGTGTTGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGTGGCAGTGTGAGCCCCAAACAAAGGCAAACTCACTCAATGACAGACTAA 2757 0.411 MTKNQQHLLTPTPIINQNQFELQGKEQLESEGSSPLTVTSRVLYMLGDITAGPALMFTQWLQSVRKRASNHRSSGFPRSSSTITPFCFGEYAEDAKIDEMPDQTEISLWDRLGKAEMLDIESSSFSWDMLSSLHHTEHTSSNEHSEDETNKALELTVNSGGVVFFALFNVHGSDDAFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKEAAEKARDAASCERDAIGETTCSELLEALELSRCLLFMSYVHGSPLLESCHTFESRDSAETVSAALGRVIMLDLVIRNEDRLPCRQLRWRGNPANLLLADKTISSNLDTIGEAFDFDINRYGPVVAGTLQKERRSTSVVGRSSSQNHGIRSQVSLLSQISESSDDMCLKSQTSGESLFTGSKIVAIDSVVPRRPPAGKRADDQVNYPKLVELVLNSSEFSSCLLYDITGGKLGSPPLEDINTTVDVQGSEVTSVVHEFRSGFRAALRDLQGFHIFLLTLHKKLDNVLRSFNNTISKIPLGDSEKEDSPSPATGSCLSPTSKERCSNDSHRDLSDTDSQRSAPRASPSSCNRDFCDSASPMSREGWHGKSSKGSVEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKFCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERIALISEAANTERPSAVTSNLFIGGAQSARSVYTMQHMGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDTENSDIGVLFDEACDFIEDVEKGGQRVLVHCFEGKSRSVTVLLAYLMLRKNFTLLEAWNAMRKVHRRAQPNDGFAKILQELDHKLHGKVSMEWQRRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPKQRQTHSMTD 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04735 918 Gene3D - 273 527 IPR036940 -
Trre5g04735 918 SUPERFAMILY Protein kinase-like (PK-like) 59 431 IPR011009 -
Trre5g04735 918 CDD DSP 693 830 - -
Trre5g04735 918 Pfam Dual specificity phosphatase, catalytic domain 701 831 IPR000340 GO:0008138|GO:0016311
Trre5g04735 918 Gene3D Protein tyrosine phosphatase superfamily 675 847 IPR029021 -
Trre5g04735 918 MobiDBLite consensus disorder prediction 525 581 - -
Trre5g04735 918 MobiDBLite consensus disorder prediction 566 581 - -
Trre5g04735 918 MobiDBLite consensus disorder prediction 551 565 - -
Trre5g04735 918 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 24 917 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trre5g04735 918 Pfam Actin-fragmin kinase, catalytic 105 360 IPR015275 -
Trre5g04735 918 SMART dsp_5 692 834 IPR020422 GO:0006470|GO:0008138
Trre5g04735 918 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 692 837 IPR029021 -
Trre5g04735 918 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 761 813 IPR000387 GO:0016311|GO:0016791
Trre5g04735 918 FunFam Dual specificity protein phosphatase PHS1 664 838 - -
Trre5g04735 918 MobiDBLite consensus disorder prediction 535 550 - -
Trre5g04735 918 ProSiteProfiles Dual specificity protein phosphatase domain profile. 692 837 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04735 Trre-Chr5 49259220 49264739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04735 29 903 Protein tyrosine phosphatase (PTP) family AT5G23720 62.934 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04735 K14165 - gmx:102661225 1247.26