Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04726 ATGAAGAGAGGTAGAGATGAAGCTAGTAAAGAAGAAGAGAGGGTCTTGTATGTAGATGAAGAGTCATGTTTAATAGCCAAGGATGACTTGCCTAGGATCAGTCTTTTGCTTGTTTTTGCCTTTATTATTGCTCAGCTGGTTGCAACTGCTATATCAGCATTTGCTAATTGGGAAATTGCTGGAATCAGAAGCATAGGTATGGGTTGGGCAGGAGTCATTTGGTTGTTCAACATTGTAACTTATGTTTTTCTTGATCCTTTAAAGTTTGCTGTTGCTTATCAACAAAGCGGAAGGGCTTGGAATCTGGTGGTAAACCAAAGAACTGCATTCACCAACAAAAATGATTTTGGTAAAGAATCTCGTGAAGCTGCATGGGCTGCTGAGCAGAGAACCTTGCATGGTCTTCGCTCTTTTGAGTCAAAAGGGTTTGCAGAGAAGCACAACAACCATAGGGAAATAAATACAATGGCAGACGAGGCTAAGAGGCGAGCAGAGTTAGCAAGGGCTATACTTCAATAA 519 0.4123 MKRGRDEASKEEERVLYVDEESCLIAKDDLPRISLLLVFAFIIAQLVATAISAFANWEIAGIRSIGMGWAGVIWLFNIVTYVFLDPLKFAVAYQQSGRAWNLVVNQRTAFTNKNDFGKESREAAWAAEQRTLHGLRSFESKGFAEKHNNHREINTMADEAKRRAELARAILQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04726 172 PANTHER CALCIUM-TRANSPORTING ATPASE 32 131 - -
Trre5g04726 172 Gene3D - 16 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04726 Trre-Chr5 49084157 49086925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04726 32 168 Primary Pumps ATPases AT3G60330 59.124 5.60e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04726 K01535 - gmx:100794938 209.92