Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g04686 | ATGGGCAGTATAAAAGGAAAATGTAAGAAGAATGTGATATTAAAGGCATGGCGATCATTTGGAGGTGGAGGTGCAAATAGAAATATGAGGTCACTACTACTTAATAAGGATACTTCAAAATCATTTTCACAAAATGTGAAGGGTAAAATATTAAAAACCCCAAATGGTTGTTTTTCAGTTTATGTTGGACCTCAAAGACAAAGATTTGTTGTAGAGACCAAGTTTGTTAACCACCCATTATTCAAGATGTTACTAGATGAAGCAGAGGTGGAATATGGGTTTCAAAATGATGGCCCTATTAGGCTTCCATGTAATGTTGATTTGTTCTTTAAAGTATTGGCTGAGATGAATAATTTTGAGGAAGAGGATCATATTAATGAGGCTAAGGGAATTTCTTGTTTTTGTTCTTCGAAACCCAGCATCTATTCTTTGTTATATGAATAA | 444 | 0.3378 | MGSIKGKCKKNVILKAWRSFGGGGANRNMRSLLLNKDTSKSFSQNVKGKILKTPNGCFSVYVGPQRQRFVVETKFVNHPLFKMLLDEAEVEYGFQNDGPIRLPCNVDLFFKVLAEMNNFEEEDHINEAKGISCFCSSKPSIYSLLYE | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g04686 | 147 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 43 | 111 | IPR003676 | GO:0009733 | |
Trre5g04686 | 147 | Pfam | Auxin responsive protein | 47 | 114 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g04686 | Trre-Chr5 | 48808393 | 48808836 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g04686 | 54 | 123 | Calmodulin-binding Proteins | AT3G43120 | 44.286 | 1.82e-17 | 72.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre5g04686 | K14488 | - | gmx:100789525 | 134.035 |