Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04685 ATGACGAACCCAGAAATAATCTCTACAGTTGAGCTTAATGTAAAGCAAGGAGAACCGATTCGAGTTCAACCTGAGGAAGAAACAGAAAAGGGACTCTACTTTCTTTCAAATCTCGATCAGAATATCGCGGTACCAATGCGCACAATTTATTGCTTTAAATCAGAAACAAGAGGAAATGAAAAAGCAGCACAAGTTATAAAAGATGCTTTGTCAAAAATTCTTGTCCCTTATCATCCTATGGCAGGAAAATTGATTATAAGCTCAGAAGGGAAGTTGATTGTGGATAATACAGGGGAAGGTGCAGTATTTGTTGAGGCTGAAGCAGATTGTGGTATAGATGAAATTGGTGACTTAACAAAACCAGATCCTCATAGGCTTGGGAAATTGGTTTATAATACACCAGGTGCTAAGAATATATTAGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGTGGAGGATTCACTTTGGGACTAAACATGATCCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGGCTGAAACAGCCAGAGGTTTAGACTTAAAAATTCAACCATTTCTCGATCGAACCATACTCAAATCGCGCAACCCTCCCAAAATAGAATTCCAACACCACGAATTCGACCAACTCAAAGATCTATCAAACTCCGAAAAAATCTACGAAGGAGAGAAAATCATCCATAAATCCTTCTTTTTCAATCCTGAAAAACTCGATTCGCTAAAAAAAAAGGCGACAGAAGACGGAGTTTTAACAAAATGTTCAACTTTTGAAGCACTATCGGCTTTTGTATGGAGAGCTAGAACTTCGGCTTTAAAAATGCATCCTGATCAACAAACAAAATTACTCTTCGCAGTTGATGGACGGTCGAGATTCGTTCCGCCAATACCAAAGGGATATTTTGGCAATGCTATTGTGCTAACAAATTCTTTGTGTAAAGCAAGTGATTTATTAGAGAACCCTTTATCATTTTCAGTTGGATTGGTTCACAAGGCAATTGATATGGTTACAGATAGTTATATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGACCTTCTTTAACAGGAACACTTTTGATTACAACATGGACTAAATTGTCTTTTGACACTACTGATTTTGGTTGGGGTGAACCTTTGTGTTCTGGTCCTGTTACATTGCCTGATAAAGAAGTTATTTTGTTCTTGTCACATGGTCAAGGAAGAAAAGGTATAAGTGTGCTTCTTGGTTTGCCTGTTTCTGCTATGAAACGTTTTGAAGAATTGGTGATTAATATATGA 1308 0.3754 MTNPEIISTVELNVKQGEPIRVQPEEETEKGLYFLSNLDQNIAVPMRTIYCFKSETRGNEKAAQVIKDALSKILVPYHPMAGKLIISSEGKLIVDNTGEGAVFVEAEADCGIDEIGDLTKPDPHRLGKLVYNTPGAKNILEMPLMTVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWAETARGLDLKIQPFLDRTILKSRNPPKIEFQHHEFDQLKDLSNSEKIYEGEKIIHKSFFFNPEKLDSLKKKATEDGVLTKCSTFEALSAFVWRARTSALKMHPDQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCKASDLLENPLSFSVGLVHKAIDMVTDSYMRSAIDYFEVTRARPSLTGTLLITTWTKLSFDTTDFGWGEPLCSGPVTLPDKEVILFLSHGQGRKGISVLLGLPVSAMKRFEELVINI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04685 435 Gene3D - 217 434 IPR023213 -
Trre5g04685 435 Gene3D - 13 216 IPR023213 -
Trre5g04685 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 431 - -
Trre5g04685 435 FunFam Tryptamine hydroxycinnamoyl transferase 219 433 - -
Trre5g04685 435 FunFam Spermidine hydroxycinnamoyl transferase 12 215 - -
Trre5g04685 435 Pfam Transferase family 21 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04685 Trre-Chr5 48803528 48806876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04685 10 435 Monolignol Biosynthesis Gene Families AT5G48930 35.135 6.44e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04685 K15400 - gmx:100794490 716.842