Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04667 ATGGTTTCAATAAAAGAGAAATTGAAGAAATTTATTGGACACGGATGGGTGGTGTTTGTGTGTTCAATGTGGGATATGTCATTTGCAGGTACAGCATACATGTTTGGAAGCATATCACCAGTTATAAAAAGCAGCATGGGTTACAATCAGAAACAAGTTGCTTTCTTAAGTGTTGCTAAGGATTTGGGTGACAACGTTGGACTTCTTGCTGGTTTTATCAGTAAGATTTGGCCTGTTTGGGGAGTTATACTTGTTGGTGTTGTTCAGAATGTTGTTGGTTATGGTCTTGTTTGGCTTGTTGTTACTCATAAGATTCCTTCTTTGCCTTTATGGATGCTATGTTTTTTCATCCTTGTTGGACAAAATGGATCAACATACTACAACACAGCAGCATTGGTATCAAGCGTGCAAAGTTTCCCAGAAAACCGAGGCCCCGTGGTAGGAATATTGAAGGGATTTGTTGGCTTAAGCGGCGCAATATGGACTCAAATTATAGCCATGATCAATCTCCCTGATCAAGCTTCTTTGATTTTCATCATAGCAGTTGGACCTGCAATGGTTTCTTTAACTTTCATGTTCATCATAAGACCAGTTCATCGTTTGAATAAATCTAGACCTTCGGATGAATCAGGATTCATGTTTATTTACAGCATTTGTCTTCTCTTAGCTGCTTATCTTATGGGAGTTTTGTTGCTAGAGAACATGTTTGATTTGGATCAAAAAGTTATCACTTTATTTGCTGTCATTTTGATTGTTTTTATATTGCTTCCAATTATAGTTCCTATTCTATTGGTTTTCTTTTCTGAACCGAAAAGTATCGATGAGGAACAACTTCTTCAACCTTCGATGGTTATACAGAATGAAACTAGTAGCGATAATGCCATTTCTAAACATGTTGTTTTTCAAGATCAGAAAAAGTCTTCAAATCTAGAGGTACCTCCAAGGGATATGGTTCAGTTTCATGCTAGAGTTTTCCAAGCAATAACTTCAGCTGTGAAGAAAATCAAGCAAAAAAATGGGCCTCATAGAGGAGAGGATTTCACCTTAACACAAGCACTTGTAAAAGCTGACTTTTGTCTCATGTTCTTGTCTATCATTTTGGGCTGTGGATCTGGTTTGACAATGATAAACAACATGGGTCAGATTTGTCAATCTTTGGGAGACAACAATGTTAATGTTTACGTATCGGTTATCAGCATATCCAATTTCCTCGGTCGTGTTGGTGGTGGCTACTTCTCTGAAGTTATAGTAAGAAATTTTGGATACCCGAGACTTGTGGCATTGGCGATTATTCAGGGAGTGATGTCTTTGGGACTTTGCTACTATACCATAGGCTTGGTTGGACAAGTTTATGTGATAGCAATAACTATGGGTTTTGGGTATGGTTCACATTGGTCAATTGCATTAGCAGCAACTTCAGAAATATTTGGCTTAAAGAACTTTGGTACACTCTACAATTTTCTTACAATTGCTAGCCCAGTTGGATCTCTGCTTGTATCTGGATTAGCGAGCACGATATACGACTATTACGCAGAGCAGCAAGCAAAGCATAGAAATGATAATAATGAATTGCTTCTTTGTGAGGGAAACATTTGCTATTCCTTAACATGTGGAATTTTAGCAGTAGTTTGCTTGTTTGCAGCTGGTTTGAGCTTGATCATAGTTCAAAGGACTAAGAGGTTTTATTCACAACTTTATGGAAAGTCTTTATCTTGA 1716 0.3765 MVSIKEKLKKFIGHGWVVFVCSMWDMSFAGTAYMFGSISPVIKSSMGYNQKQVAFLSVAKDLGDNVGLLAGFISKIWPVWGVILVGVVQNVVGYGLVWLVVTHKIPSLPLWMLCFFILVGQNGSTYYNTAALVSSVQSFPENRGPVVGILKGFVGLSGAIWTQIIAMINLPDQASLIFIIAVGPAMVSLTFMFIIRPVHRLNKSRPSDESGFMFIYSICLLLAAYLMGVLLLENMFDLDQKVITLFAVILIVFILLPIIVPILLVFFSEPKSIDEEQLLQPSMVIQNETSSDNAISKHVVFQDQKKSSNLEVPPRDMVQFHARVFQAITSAVKKIKQKNGPHRGEDFTLTQALVKADFCLMFLSIILGCGSGLTMINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRNFGYPRLVALAIIQGVMSLGLCYYTIGLVGQVYVIAITMGFGYGSHWSIALAATSEIFGLKNFGTLYNFLTIASPVGSLLVSGLASTIYDYYAEQQAKHRNDNNELLLCEGNICYSLTCGILAVVCLFAAGLSLIIVQRTKRFYSQLYGKSLS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04667 571 CDD MFS_Mch1p_like 16 548 - -
Trre5g04667 571 SUPERFAMILY MFS general substrate transporter 16 560 IPR036259 -
Trre5g04667 571 Gene3D MFS general substrate transporter like domains 358 562 IPR036259 -
Trre5g04667 571 Pfam Nodulin-like 16 262 IPR010658 -
Trre5g04667 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04667 Trre-Chr5 48684754 48687399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04667 3 569 Nodulin-like Gene Family AT5G14120 50.260 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04667 - - gmx:100784744 821.617