Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04665 ATGGAGTGCAGAAAAGATGATGCCTTAAGGGCTAAAGAGATCGCAGAGAAGAGGTTTTTGGAAAAGAAGTTTGTTGCTGCATGTACACTTGCAAAGAAGGCTCAATCCTTGTATCCCAACATTGACGGCCTCCCTGCACTGATAGCAACGATGGATGTGTATGTCGCTTCTCTAAACAAAGTTGGTGAAGAATATGATTGGTATGAGATCCTCGGTGCAAAACGCTTGGATGATGATGAAACTCTTCGGAAATGTTATAAGAACATGGCTCTTATTCTGCACCCTGATGAAAACAAGTCAGTAGGTGCGGAGGGCGCATTTAATCTTGTCTTACAGGCTTGGACTATATTATCTGATAAAGCTAAGAGAACCACCTTTGATAAAAAGTATCGCTTGTGGGATTTGTTTAAAGATATGCCTGGTGGGATACCTCCTATACTTGCTAGTCAGAACGGTTTGTCGAATACCGTTAACCCTGCTGGGAGACCTTCTGTACCCGCTAGTCAGAATGGTTTGTCTAATGCCGCTAACCCTGCTAGGAGACCTCCTACATTTTGGACCTTGTGCAGTTTATGCAGAACATATTATGAGTACCTTGCTATCTATAAAGACTGCAATCTTGCCTGCACCACCTGCAAAAAGCCATTTTTAGCTTCTGAGGTACCACCCCCATCTGTATACAAAAATGCATCATCCACTTCAAGACCTTCTCAGATGAAGCAACACAAATTCGACTCAACTGGAGTGGATAGAAACTGTCATGTTTCAAGTAGGACACAGGTGTCGGCTGTCAACTCATCGCTTGGTTCTATGCCTAGTGGCATTTCTGGTGGAACTCTCGGTTCTTTTACGAGGCAATCTGCAAATTTGAAGAGAAAGTATGAAGATTCAGCACCTGTCATGAGGGAGGAGGTGCATTTTGGAAAAACTCATGCTGTTGAGAGAACTCCTGGTGGTTCAGATTTTCAGTCTTGTCAGAAAAAAAGGTGCACAGGTGAACATAAAGTTGATGGTGATAGAAGAGACATGGAAATTGAGATGGCATTAAAAAAAGGAATAAATTTGACCAATGGGTTTGGGTCTCTGAAGAATAGTTTTGATGCTGGAAAGGTTAGTGTTGCTGGAAATTTCAGACGAAATGGTATTAGGGACATGTCTCAGCAGCATATGAGGAACATCTTGGCGGGAAAGGCCCGGAATGTGATTCTTAAGAAGCTTGATGAGTTGAAGGAGAGTCGTAGAAAGCTTGATAAGTGGAAGGCGATTCGTGAAACGCTTGATCCACGGTATCCTTCTTCTATACTAAAGAATACTGATTCAGAAGTCAGAGTGAAAGACACAGTTAAGGCTATTAATGGTGTGAAGCCTGGTCCACAAGCAATTCTTGATTCTGAGACCAACAAAAACTTTATCTCTGCTGATTCAGAGGTGCTTGGAGTCTCCATGGATGTTCCAGACCCAGATTTCCATGATTTTGATGGGGACCGGGTTGAGGACACTTTTGGTGAGAATCAGGTGTGGGCTGTTTATGATGATGATGATGGCATGCCGCGCTACTATGCCTTTATCCACAGTGTGATCTCAAAGAAACCTTTCCAAATGAAGATAAGCTGGCTGACCTCTAAAACCAATGATGAATTGGCACCGATAAGGTGGGTGGCATCTGGCTTTCCAAAGACCACCGGGGATCTCCGACTAGGCAAGCGTGCAATCGCTAGCACTCTCAATTCTTTCTCACACAGGGTCGAGTGGACAAAAGGTTCAAGAGGACTTATCCATATATATCCAAAGAAAGGTGAAGTTTGGGCTCTATATCGGAACTGGTCCCTGGATTGGGATGAACTCACTAAAGACCAAATCATACATCAATATGACATGGTGGAAGTGCTTGGAGACTACAGTGAAGAGCACGGTGTGAATGTTGCTCCGCTTTTCAAGGTTGCAGGTTTCAGGACAGTTTTCCGCAAGAATGCAGATCCGAGAAAAATCAGAAACATTCCGAGGGCAGAAATGTTTCGTTTTTCACACCAAGTACCTTCATACTTGCTGACTGGACAAGAAGGTGACAATGCTCCTGAAGGTTGCTTGGAACTGGATCCTGCTTCTACACCTATGGAACTTCTCCAGTTGACCACCCATGATGCTCCAAAGCAAGAAGATTCTGCTGAAGATGTTCCGAGAAAGGAGGTGGCTGAAGCAAATGAAGGGAGGGCATGGCCTGAGAATTTGCATGTATATAAGCGGAAGCGTTTTGGGGGAAAGAGCAAGTAG 2271 0.4399 MECRKDDALRAKEIAEKRFLEKKFVAACTLAKKAQSLYPNIDGLPALIATMDVYVASLNKVGEEYDWYEILGAKRLDDDETLRKCYKNMALILHPDENKSVGAEGAFNLVLQAWTILSDKAKRTTFDKKYRLWDLFKDMPGGIPPILASQNGLSNTVNPAGRPSVPASQNGLSNAANPARRPPTFWTLCSLCRTYYEYLAIYKDCNLACTTCKKPFLASEVPPPSVYKNASSTSRPSQMKQHKFDSTGVDRNCHVSSRTQVSAVNSSLGSMPSGISGGTLGSFTRQSANLKRKYEDSAPVMREEVHFGKTHAVERTPGGSDFQSCQKKRCTGEHKVDGDRRDMEIEMALKKGINLTNGFGSLKNSFDAGKVSVAGNFRRNGIRDMSQQHMRNILAGKARNVILKKLDELKESRRKLDKWKAIRETLDPRYPSSILKNTDSEVRVKDTVKAINGVKPGPQAILDSETNKNFISADSEVLGVSMDVPDPDFHDFDGDRVEDTFGENQVWAVYDDDDGMPRYYAFIHSVISKKPFQMKISWLTSKTNDELAPIRWVASGFPKTTGDLRLGKRAIASTLNSFSHRVEWTKGSRGLIHIYPKKGEVWALYRNWSLDWDELTKDQIIHQYDMVEVLGDYSEEHGVNVAPLFKVAGFRTVFRKNADPRKIRNIPRAEMFRFSHQVPSYLLTGQEGDNAPEGCLELDPASTPMELLQLTTHDAPKQEDSAEDVPRKEVAEANEGRAWPENLHVYKRKRFGGKSK 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04665 756 PRINTS DnaJ domain signature 86 101 IPR001623 -
Trre5g04665 756 PRINTS DnaJ domain signature 68 86 IPR001623 -
Trre5g04665 756 PRINTS DnaJ domain signature 102 122 IPR001623 -
Trre5g04665 756 MobiDBLite consensus disorder prediction 225 243 - -
Trre5g04665 756 Pfam Domain of unknown function (DUF3444) 481 687 IPR024593 -
Trre5g04665 756 PANTHER BNAC03G44070D PROTEIN 1 704 - -
Trre5g04665 756 Gene3D DnaJ domain 62 132 IPR036869 -
Trre5g04665 756 MobiDBLite consensus disorder prediction 713 738 - -
Trre5g04665 756 MobiDBLite consensus disorder prediction 716 738 - -
Trre5g04665 756 SMART dnaj_3 65 122 IPR001623 -
Trre5g04665 756 CDD DnaJ 66 119 IPR001623 -
Trre5g04665 756 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Trre5g04665 756 MobiDBLite consensus disorder prediction 224 251 - -
Trre5g04665 756 Pfam DnaJ domain 66 127 IPR001623 -
Trre5g04665 756 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04665 Trre-Chr5 48670145 48672742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04665 5 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.826 1.75e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04665 - - tpra:123918026 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04665 5 48670145 48672742 Trre5g04665 5 48670145 48672742 ECH