Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04615 ATGGGTAAAAAGAGCAAGAGCTTTTTCTCCTTTCGCCGTCGCTCCAAAAAACTACCACCACCACAGCCTCCGCCGTCTACGCTTGAAATCACCGGTTCACCGTCGGAAAATCCATTAGTCCTTAAACCGAAGAAAAAAACCGGCGGAGCCAAATTATGGATGCGTTTCGACCGCTCCGGCAAGTCAGAGCTCGTCGAGTGGGAGAAAAACACGATCATCCGCCTTGCCGCTATTCCCGCCAGAGACCTAAGGATTCTCGGTCCTGTCTTCTCTCATTCCTCCAATATCCTTGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAGTTTATAAAAGCAATAGTAACAGCTGAAGAAGTTTTATTGCTTGATCCATTACGACAAGAGGTTCTTCCATTTGTTGAACAATTGCGGCAACAACTTCCACATAAGACTCAACCTAAGCTTCTCGGTGGTGGTGGTGGTGATGATAATGTGACTGAAACTGCTGAAGGTTTACAATCGGAACTTCCGCTTCCGTTCGAGTTTCAAGTGTTGGAGATTGCTTTGGAAGTTGTTTGTACTTATTTGGATTCAGATGTTGCTGACCTTGAAAGAGGTGCTTATCCTGTGTTGGATGAATTGGCTAGGAATGTTAGTACCAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTAACTCGATTGCTCGCGCGCGTGCAGAAGGTACGCGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGGAAATGGTTGCAAAACCAACAAGCCGAGGCTCATTTGGCAGCCACAACCCCGAATAACCTTTCAATTGTTCGACGGCTTAATTCTACCAGAAGTGGAAGTCTTGTGACTAGCAACGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAATTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGATTATGTCAACATCCAACTTGATAACCATAGGAATGAACTTATCCAACTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTATTGAGACTTTGATAGCCGGTGCATTTGGTATGAACATTCCATGTAGCTTATACAATACACACGGAATATTTTGGCATGCTGTTGGGATTATGACTGCAGTTTCCATGGTGATTTTCGTGCTTGTTTTAGCATATGCTAAATGGAAAAAGTTGTTAGGTTCGTAA 1248 0.4271 MGKKSKSFFSFRRRSKKLPPPQPPPSTLEITGSPSENPLVLKPKKKTGGAKLWMRFDRSGKSELVEWEKNTIIRLAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKTQPKLLGGGGGDDNVTETAEGLQSELPLPFEFQVLEIALEVVCTYLDSDVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQAEAHLAATTPNNLSIVRRLNSTRSGSLVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCSLYNTHGIFWHAVGIMTAVSMVIFVLVLAYAKWKKLLGS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04615 415 Pfam CorA-like Mg2+ transporter protein 291 403 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g04615 415 MobiDBLite consensus disorder prediction 1 42 - -
Trre5g04615 415 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 40 413 IPR039204 -
Trre5g04615 415 FunFam magnesium transporter MRS2-4 128 346 - -
Trre5g04615 415 Coils Coil 219 253 - -
Trre5g04615 415 Gene3D Magnesium transport protein CorA, transmembrane region 126 346 - -
Trre5g04615 415 CDD Mrs2_Mfm1p-like 53 412 IPR039204 -
Trre5g04615 415 FunFam Magnesium transporter MRS2-1 41 124 - -
Trre5g04615 415 Gene3D Magnesium transport protein CorA, transmembrane region 353 412 - -
Trre5g04615 415 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 402 IPR045863 -
Trre5g04615 415 Gene3D - 41 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04615 Trre-Chr5 48155894 48158607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04615 42 415 MRS2 Gene Family AT3G58970 70.558 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04615 K16075 - gmx:100812561 597.43