Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04569 ATGAACACAAGCAAAGCCGAAGCAGAACGGTTACTAGAGATCGGAGAAGAACTTTTACAAAAACGCGATCTAAAAGGTTCAAGAGAAATAGCAAATCTCGTTCAAGAAACCGAACCTCTTCTAGAAGGTTCTGATCAGATCTTAGCAATTGTCGATGTTCTCGAAGCAGCAGAAAAGCCTCTGAATCTCAACAATCATCATCTCGATTGGGTTTATGAAGGTTGTTGTTTGATGTGTCAAAAATGTGATAAATCTTTTCATGGTGTTTCGATTCCTTCTCTTCCACCGATTGTGCCGGGACAAGAAGCTTATAATGTTTCTTGGGGAATGTTTCCGATGGGTTTTGTTTTTGAAAGTTTGGAAAATGGTGGCAGTGGTGGTGATGATGTTGTTGGTTCTGGTACGAGGAAGTGA 414 0.4058 MNTSKAEAERLLEIGEELLQKRDLKGSREIANLVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWVYEGCCLMCQKCDKSFHGVSIPSLPPIVPGQEAYNVSWGMFPMGFVFESLENGGSGGDDVVGSGTRK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04569 137 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04569 Trre-Chr5 47586204 47586920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04569 2 70 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 57.971 7.51e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04569 - - tpra:123915791 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04569 5 47586204 47586920 Trre5g04569 5 47586204 47586920 ECH
Trre9g03494 9 43746842 43747897 Trre5g04569 5 47586204 47586920 PCT