Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04537 ATGGGCTATCTTTTTTGCAATGCAGAATCTGCAATTGCTACTTGTGATCCTCACTATTGGGATCTCAAAAAAAGAAACAAATCAATAACAAACCGTACACATACTATCAAAGAGTTTAACTACACCGACCTCATCGCCGCTACTAACGGTTTCTCTGCCGAAAGCTACCTAGGCAAAGGTAGCCACGGCAGAGTTTACCGAGCTATCTTAAACGGCGGCGATCTGATCGTCGCCGTTAAAACAACAAAGTTAACTACAAAGAAAAATAATAATCACAACAACAACAACAACAACTGCACCGGTTGTGGTAACTGTACAAGTCCAGCTGAAAACGAGATCGAGATTCTTTCACAAGTTCCAAATCATCGTCTCGTGAATCTCATCGGTTACTGCACCGATCCTAACGGCAATAAATTAATTGTCGTTGAATATATGCCAAACGGTTCACTTCACGATCTATTACATTCTACAAATAAACCGCCCGGTTGGACCAAACGGTTCCGGTTCGCATTACAAGTTGCGAAAGCGGTTCAAACTTTGCACGGTTCAAATCCACCGGTGATTCACCGTGATATTAAATCCTCCAATGTTTTAATCGATCGGGATTGGAAAGCGAGACTCGGTGATTTCGGTCTTGCTCTTAGAGGACACGTGGAGGACGTTCGTGTTAAGTGTACGCCACCGGCGGGGACATTAGGATATCTCGATCCATGCTATCTTGCGCCGGAGGATCTTAGTGCGAAGAGTGATGTGTTCAGTTTCGGGATCTTGTTATTGGAGATTATTAGCGGAAGGAATGCTATTGATGTTAATTATAGTCCTCCTTCGGTTGTTGATTGGGCGGTTCCGTTAATTAGAAGAGGCGATTTCGTCGGGATCTGTGATCGGAGAATTGGAACGCCGTCGGATATGGCGGTGATGAGGCAGATTGCTGTGATTGCAGCGAGATGTGTTAGATCGACGGCGGAGAAGAGACCGGCGATGGTGGAGGTTGTGGAGTGTCTTAAATTGGCGCGGAAGAGGATTCATTCGTCGCCGATTTGGAGTAGTTTGAGACGGCGCGTGACGCGTGTTGAGAGCGCGCAACCGTTGATGAGTTGGGAAGAAGCTTATGATCATGATTATGGTTATAATAATAATAATAATTATGATTATCATCATAGTAATTATGATTGGGATGATAATAAGAGTGAGGAAGTTGTGAAGATTGTAAAGAGTGGGAGCAGTAGAAGAAAGAGTAAAGTATCAAGTGTGGCGAGTGTAGAGTATGATGTTAAACCCTCCAAAAAAGGAACGAGATCTAAGCCGTCGAAGAAAATAACGAGATCTAAGACCGTTGGTTCTTCTTCTGGTTGTGTTAGTAGTTGCAGTAGAAAAAGTGGAATTCTAATGGTTTCAGAGAAAACGGGTGTAATGAAGTTAAAAAAGTCAAAGTCAACGGGAGTCTTGCAAGGTCCTCGGCTTTTACATCAGAAGAAGAATGATGTAATTCATTCCGGTGAGTCTGAGACGATAGCATTAGCAATGTCGAAGATGATTATTAGAGATAATAAGAAGTCAGAAAAGAAAATGCTCGAAAAACCATTGGTTAATTCGTATGGTTGGGAGTCTGAATAA 1617 0.4273 MGYLFCNAESAIATCDPHYWDLKKRNKSITNRTHTIKEFNYTDLIAATNGFSAESYLGKGSHGRVYRAILNGGDLIVAVKTTKLTTKKNNNHNNNNNNCTGCGNCTSPAENEIEILSQVPNHRLVNLIGYCTDPNGNKLIVVEYMPNGSLHDLLHSTNKPPGWTKRFRFALQVAKAVQTLHGSNPPVIHRDIKSSNVLIDRDWKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFVGICDRRIGTPSDMAVMRQIAVIAARCVRSTAEKRPAMVEVVECLKLARKRIHSSPIWSSLRRRVTRVESAQPLMSWEEAYDHDYGYNNNNNYDYHHSNYDWDDNKSEEVVKIVKSGSSRRKSKVSSVASVEYDVKPSKKGTRSKPSKKITRSKTVGSSSGCVSSCSRKSGILMVSEKTGVMKLKKSKSTGVLQGPRLLHQKKNDVIHSGESETIALAMSKMIIRDNKKSEKKMLEKPLVNSYGWESE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04537 538 SUPERFAMILY Protein kinase-like (PK-like) 37 368 IPR011009 -
Trre5g04537 538 PANTHER OS01G0253100 PROTEIN 32 338 - -
Trre5g04537 538 Pfam Protein tyrosine and serine/threonine kinase 54 335 IPR001245 GO:0004672|GO:0006468
Trre5g04537 538 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Trre5g04537 538 ProSiteProfiles Protein kinase domain profile. 51 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g04537 538 MobiDBLite consensus disorder prediction 415 452 - -
Trre5g04537 538 FunFam Serine/threonine-protein kinase-like protein 145 348 - -
Trre5g04537 538 Gene3D Phosphorylase Kinase; domain 1 35 144 - -
Trre5g04537 538 SMART serkin_6 51 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g04537 538 Gene3D Transferase(Phosphotransferase) domain 1 145 349 - -
Trre5g04537 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04537 Trre-Chr5 47341192 47342808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04537 17 346 Receptor kinase-like Gene Family AT3G59420 40.597 2.50e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Trre5g04537 PK_Tyr_Ser-Thr 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04537 - - cam:101503747 754.207