Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04463 ATGAAGCACAAAAGCAGAGTAAAACGCGTGGACGACGTTGCCGTAATCAGTTGCGGACGTTCTTGCCGGAAAAAGAATGAGAGAAGGCGATTACGCCATTTTGGGAAGTTCGTTGAAATTCAGTTTGATTCAAGTGGTAAAATATCTGGCAGGGATGTTTTAGCGAAAACTGTCTATGCTCGTTTGTTTGATTGGCTTGCTGATAAGATCAATAAAACGGTTGGGCAAGATATCAATTCCAGGATGCAAATTCGAATATTGGATATATATGGCTTTGAGTCTTTTAAGGATAACAGAAGCCCATTGGTATCATTGCCCTGTTAG 324 0.4074 MKHKSRVKRVDDVAVISCGRSCRKKNERRRLRHFGKFVEIQFDSSGKISGRDVLAKTVYARLFDWLADKINKTVGQDINSRMQIRILDIYGFESFKDNRSPLVSLPC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04463 107 Gene3D Kinesin motor domain 74 94 IPR036961 -
Trre5g04463 107 PANTHER MYOSIN 49 99 - -
Trre5g04463 107 Gene3D Myosin VI head, motor domain, U50 subdomain 50 73 - -
Trre5g04463 107 ProSiteProfiles Myosin motor domain profile. 1 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre5g04463 107 Pfam Myosin head (motor domain) 51 98 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre5g04463 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 98 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04463 Trre-Chr5 46618682 46620498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04463 42 98 Myosins gene family AT4G33200 66.667 9.12e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04463 K10357 - zju:107420053 92.8189