Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04453 ATGAAGAAGGTAGTGGTCACCGGTGCATCTGGTTACCTTGGAGGAAGACTATGTCACGCTCTCATCCGACAAGGTTACTTCGTTAAGGCTCTCGTTAGACCCACTAGCAATCTTTCCGCACTTCCTTCTTCTTCCGAAATTGTCTATGGTGACATTACCGACTATACATCTCTTCTCTCCGCTTTCTCCGATTGTTCCATTGTCTTTCACGTCGCTGCTCTTGTCGAGGCTTGGCACCCCGATCCCTCTAAATTCTTCTCTGTCAATGTTGAAGGTTTGATGAATGTTTTAGAAGCGGTGAAGAAAACCAACACTGTGGAGAAACTAATATATACTTCGTCAATTGTTGCTCTTGGACCAACCGGCGGATCAATTGCCAATGAGAGTCAAGTTCATCATGGGAAATATTTTTGCACGGAATATGAGAAATCAAGCTTGCCTCGGACAAAATTGCACTTCAAGCTGCATACGAGGGGCAAACACTGTTGCAAAAACGCTGGTAGAACGTTTCAGTGGTCGTTTACCTGGTTACATAGGCAGTAA 543 0.4475 MKKVVVTGASGYLGGRLCHALIRQGYFVKALVRPTSNLSALPSSSEIVYGDITDYTSLLSAFSDCSIVFHVAALVEAWHPDPSKFFSVNVEGLMNVLEAVKKTNTVEKLIYTSSIVALGPTGGSIANESQVHHGKYFCTEYEKSSLPRTKLHFKLHTRGKHCCKNAGRTFQWSFTWLHRQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04453 180 PANTHER PROTEIN YEEZ 1 130 - -
Trre5g04453 180 Pfam NAD dependent epimerase/dehydratase family 4 152 IPR001509 -
Trre5g04453 180 Gene3D - 1 160 - -
Trre5g04453 180 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 139 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04453 Trre-Chr5 46560490 46563424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04453 3 117 Monolignol Biosynthesis Gene Families AT2G33590 38.400 2.16e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04453 K15891 - zju:107420927 221.09