Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g04446 | ATGGTTGATAAATGGTGGGAATTTGTTTGTCCTTCTGATAAAGGAAATGATGATCCTTTGATTAATCCATTTGTGGAAGAAGCTCCTGATCTTGAAGAAGTCGGCGTTGAAAAAGTGCTTATTACTGTTTGTGAGAAAGATATATTAAGGGAAAGAGGGAAACTTTATCATAAGAAATTGGTAAACAGTGGTTGGAAAGGTACTGCTGAGTTTTATGAAACTCAAGAGGAAGATCATGTGTTTCATATTTTTAATCCAGATTGTGATAAAGCTAAGAATTTGATTAAACGCATAGCTGATTTCATCAATGAATAA | 315 | 0.3333 | MVDKWWEFVCPSDKGNDDPLINPFVEEAPDLEEVGVEKVLITVCEKDILRERGKLYHKKLVNSGWKGTAEFYETQEEDHVFHIFNPDCDKAKNLIKRIADFINE | 104 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g04446 | 104 | Gene3D | alpha/beta hydrolase | 1 | 104 | IPR029058 | - | |
Trre5g04446 | 104 | PANTHER | ARYLACETAMIDE DEACETYLASE | 4 | 89 | - | - | |
Trre5g04446 | 104 | SUPERFAMILY | alpha/beta-Hydrolases | 2 | 104 | IPR029058 | - | |
Trre5g04446 | 104 | Pfam | alpha/beta hydrolase fold | 2 | 82 | IPR013094 | GO:0016787 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g04446 | Trre-Chr5 | 46514965 | 46515279 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g04446 | 2 | 102 | Carbohydrate Esterase | AT3G48690 | 43.137 | 1.24e-19 | 79.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre5g04446 | - | - | var:108341277 | 189.119 |