Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04446 ATGGTTGATAAATGGTGGGAATTTGTTTGTCCTTCTGATAAAGGAAATGATGATCCTTTGATTAATCCATTTGTGGAAGAAGCTCCTGATCTTGAAGAAGTCGGCGTTGAAAAAGTGCTTATTACTGTTTGTGAGAAAGATATATTAAGGGAAAGAGGGAAACTTTATCATAAGAAATTGGTAAACAGTGGTTGGAAAGGTACTGCTGAGTTTTATGAAACTCAAGAGGAAGATCATGTGTTTCATATTTTTAATCCAGATTGTGATAAAGCTAAGAATTTGATTAAACGCATAGCTGATTTCATCAATGAATAA 315 0.3333 MVDKWWEFVCPSDKGNDDPLINPFVEEAPDLEEVGVEKVLITVCEKDILRERGKLYHKKLVNSGWKGTAEFYETQEEDHVFHIFNPDCDKAKNLIKRIADFINE 104
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04446 104 Gene3D alpha/beta hydrolase 1 104 IPR029058 -
Trre5g04446 104 PANTHER ARYLACETAMIDE DEACETYLASE 4 89 - -
Trre5g04446 104 SUPERFAMILY alpha/beta-Hydrolases 2 104 IPR029058 -
Trre5g04446 104 Pfam alpha/beta hydrolase fold 2 82 IPR013094 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre5g04446 Trre-Chr5 46514965 46515279 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04446 2 102 Carbohydrate Esterase AT3G48690 43.137 1.24e-19 79.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04446 - - var:108341277 189.119