Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04432 ATGAACAAGACACACTTTGGGTTTTTCTTCTTGCTTCTCCTTGCTTTTCATATGGTGGTACAAACTGAGGGATGGGAATGTTTCTCACAGAGCACTATGTTTAAAGGGAAGTGTTTTCGTAATCGCATTTGTGATTCGACTTGTCATGCTGAAGGTTTTCCGCGTGGTGGCAAATGCATGGATAGATTCATTAGAGGACGTTGCTTCTGCAAAAACAGTACCTGTCCACCTCCTTCTCACCGCCCGTGGAAATAA 255 0.4353 MNKTHFGFFFLLLLAFHMVVQTEGWECFSQSTMFKGKCFRNRICDSTCHAEGFPRGGKCMDRFIRGRCFCKNSTCPPPSHRPWK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04432 84 PANTHER DEFENSIN-LIKE PROTEIN 1 3 71 - -
Trre5g04432 84 SUPERFAMILY Scorpion toxin-like 26 72 IPR036574 -
Trre5g04432 84 Pfam Gamma-thionin family 27 72 - -
Trre5g04432 84 Gene3D - 20 81 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04432 Trre-Chr5 46439407 46439824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04432 8 70 Plant Defensins Gene Families AT2G02120 46.875 4.94e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04432 - K20995 lang:109326357 69.3218