Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g04431 | ATGAACAAGGCACGCTTTGGGTTTTTCTTCATTTTGCTCGTTCTCTTTGCTTCACAGATGGTGGTAAAAACTGAGGGAAGGCACTGTGAATCAAAGAGCCATAGGTTTAAAGGAATGTGTTTGAGTGATCACAATTGCGCTTCAGTTTGTCATGTTGAAGGTTTTCCAGGTGGTAATTGCAGGGGATTTCGGAGACGCTGCTTCTGCAAAAAGCGTTGTTAA | 222 | 0.4279 | MNKARFGFFFILLVLFASQMVVKTEGRHCESKSHRFKGMCLSDHNCASVCHVEGFPGGNCRGFRRRCFCKKRC | 73 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g04431 | 73 | Gene3D | - | 27 | 73 | IPR036574 | - | |
Trre5g04431 | 73 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 6 | 73 | - | - | |
Trre5g04431 | 73 | SMART | gth_4 | 28 | 73 | IPR003614 | GO:0006952 | |
Trre5g04431 | 73 | SUPERFAMILY | Scorpion toxin-like | 27 | 73 | IPR036574 | - | |
Trre5g04431 | 73 | CDD | Knot1 | 40 | 69 | IPR003614 | GO:0006952 | |
Trre5g04431 | 73 | Pfam | Gamma-thionin family | 27 | 73 | - | - | |
Trre5g04431 | 73 | ProSitePatterns | Gamma-thionins family signature. | 27 | 50 | IPR008176 | GO:0006952 | |
Trre5g04431 | 73 | PRINTS | Purothionin signature | 28 | 43 | IPR008176 | GO:0006952 | |
Trre5g04431 | 73 | PRINTS | Purothionin signature | 58 | 72 | IPR008176 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g04431 | Trre-Chr5 | 46434744 | 46435055 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g04431 | 1 | 73 | Plant Defensins Gene Families | AT5G63660 | 58.904 | 6.88e-26 | 89.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre5g04431 | - | - | gmx:100788332 | 102.834 |