Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04334 ATGGTAAATAAAGGAAACAAAACAGATGAATATATAGTGTGTTATGCACCAACCATGATAACAACAAATGGAATATGGGAAGGAGATAATCCTTTGGATTATTCTCTCCCACTTTTCATCTTGCAATTAACCTTAGTTGTTGCAGCCACTCGAATATTCGTCTTTCTTCTCAAGCCCTTTCGCCAGCCACGTGTCATAGCCGAAATTCTGGGAGGAGTAATGTTAGGTCCTTCGGTACTCGGAAAAAACAAAACATTCGCCAATGCAGTGTTTCCTCTAAGAAGTGTGATGGTGATCGAAACAATGGCAAATGTTGGTCTTCTTTATTTTCTGTTCTTGGTTGGTGTGGAGATGGACATAACCATTTTGCGCAGTGTAGGTAAAAAGGCAGTAAGTGCAGCAATTGCCGGCATGATTTTGCCTTTCATCCTTGGTGGTGCTTGTACCGTCCTTTTAAATAAACAAAACAATAGTGAAATGAACCAAGGAACTTATATTCTGTTCATCGGTGTCGCTCTTTCTGTCACTGCATTTCCTGTTCTAGCTAGAATCCTTGCTGAGCTAAAGCTTATTAACACGGATTTAGGAAGGCTTGCTCTTTCATCAGCCCTCATTAATGATGTTTGTGCTTGGATTCTCTTGGCTTTAGCAATTGCAATGGCTGAGAATGAAACAACTTCTTTTGCTTCCCTTTGGGTTTTATTGTCCGGCGCAGCATTTGTTGCCTTTTGTGTTTATGCCGTTAGACCAGCAGCCTCGTGGATAGTTAAGAAAACACCCGAAGGAGAATCTTTTAGTGAATTCTATATATCTCTTATATTAGCCGGTGTCATGGTATCCGGTTTCATCACAGATGCTATTGGAACGCATTCGGTTTTCGGAGCTTTTGTGTTTGGTTTGGCAATCCCGAATGGACCGCTCGGTGTTACTCTTGTGGAAAAGCTTGAGGACTTTGTTTCAGGACTTTTGCTCCCTCTATTTTTCGCTATTAGCGGACTAAAAACCAATATAGGACTCGTTCAAGGTTCTCACACTTGGACTATTATTATTGTTGTCATCTTTCTTGCTTGCATTGGCAAAATTGTTGGAACTCTAGCTGTTGCACTCTTTTATCAAATGCCAATTCGCGAAGGCGCTACGCTCGGTTTACTCATGAACACAAAAGGCCTTGTTGAAATGATTGTGCTCAATGTTGGAAAGGACCAAAAGATTTTTGATGAAGAATCATTTGCAGTGATGGTGATTATAACATTATTAATGACAGGAATAATTGTACCTTTTGTATCAATAATTTATAAACCATCAAGGAGAAACATAAATTACCAAAGAAGAACAGTTCAGATATTAAAACCAGATGCAGAATTTAGAGTACTAGTTTGTGTACATAGTCCTCGAAACGTGCCAACAATGATCAACCTCCTTGAAGCTTCGAATCCAACAAAGGGGTCACCAATATGCGTCTATGTGCTCCATTTGGTCGAACTTAGCGGTCGAACATCAGCAATGCTCATTGTTCACAACACAAATAAACAAGAAAATGCAGCACTTAACCGAACCGAAGCTCAATCCGACCACATTATCAACGCATTTAAAAACTACGAACAACACACATCATTTGTCTCGGTTCACCCCTTAACAGCAATCTCCCCTTACCCTACAATGCACGAAGATATATGCAATTTGGCAGAAGACAAACGTGTATCACTAATAATCGTTCCGTTTCATAAACAACAAACAGTTGACGGTGGAATGGAAACAACAAACATGGCATTTCGAACGATCAACCAAAATGTACTAGCAAATGCACCTTGCTCGGTCGGAATTCTAGTGGATAGAGGCTTAAGCGGTTCAAACCGATTAGCTTCAAATCAAACATCACATCACGTAGCTGTTATATTTTTCGGTGGTCCGGACGACAGAGAAGCGTTATGCTACGGATGGAGAATGTTGGAACACACTGGTATAAGCCTAACATTAATGCGATTCGTCCCGGGAGAACAAGTAAGCAAACCGGTTCAACAACAATATGGATCGAATTCAGATGAACCAAGTGTGGTAACAGTTGAAACAGAAAATGATATAGAAAAAATACTTGATGATAAACTAATACATGAGTTTAGGATAAGATATGGGAATGATAGTTCAGTTGATTATTTAGAAAAAGTAGTTAACAATGGAGAAGAAACAGTTGCAGCAATAAGAACAATAGATGATATTCATGATCTTTTCATTGTTGGAAGATGTCAAGGAATGATATCACCATTGACAGCAGGACTTACTGATTGGAGTGAGTGTCCTGAGATGGGTGCAATTGGTGATTTATTAGCTTCTTCAGATTTTGCAGCAACTGCTTCAATTTTGGTAGTTCAACAATATATTGGAACAGGTTCGAATGACGATGGATTAGATACACCAGATGGTCATGGTGGTGATGAATATAATAATAGTATTGACATAAATCATCACTCTGCAACACCAAGAGGACATACTGTTTTTAATACAGACAGAATCAATCATCATAATTTGTAA 2529 0.3911 MVNKGNKTDEYIVCYAPTMITTNGIWEGDNPLDYSLPLFILQLTLVVAATRIFVFLLKPFRQPRVIAEILGGVMLGPSVLGKNKTFANAVFPLRSVMVIETMANVGLLYFLFLVGVEMDITILRSVGKKAVSAAIAGMILPFILGGACTVLLNKQNNSEMNQGTYILFIGVALSVTAFPVLARILAELKLINTDLGRLALSSALINDVCAWILLALAIAMAENETTSFASLWVLLSGAAFVAFCVYAVRPAASWIVKKTPEGESFSEFYISLILAGVMVSGFITDAIGTHSVFGAFVFGLAIPNGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTNIGLVQGSHTWTIIIVVIFLACIGKIVGTLAVALFYQMPIREGATLGLLMNTKGLVEMIVLNVGKDQKIFDEESFAVMVIITLLMTGIIVPFVSIIYKPSRRNINYQRRTVQILKPDAEFRVLVCVHSPRNVPTMINLLEASNPTKGSPICVYVLHLVELSGRTSAMLIVHNTNKQENAALNRTEAQSDHIINAFKNYEQHTSFVSVHPLTAISPYPTMHEDICNLAEDKRVSLIIVPFHKQQTVDGGMETTNMAFRTINQNVLANAPCSVGILVDRGLSGSNRLASNQTSHHVAVIFFGGPDDREALCYGWRMLEHTGISLTLMRFVPGEQVSKPVQQQYGSNSDEPSVVTVETENDIEKILDDKLIHEFRIRYGNDSSVDYLEKVVNNGEETVAAIRTIDDIHDLFIVGRCQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAATASILVVQQYIGTGSNDDGLDTPDGHGGDEYNNSIDINHHSATPRGHTVFNTDRINHHNL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04334 842 FunFam Cation/H(+) antiporter 15 38 439 - -
Trre5g04334 842 Pfam Sodium/hydrogen exchanger family 45 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g04334 842 MobiDBLite consensus disorder prediction 798 842 - -
Trre5g04334 842 Gene3D - 474 756 - -
Trre5g04334 842 MobiDBLite consensus disorder prediction 816 842 - -
Trre5g04334 842 PANTHER CATION/H + ANTIPORTER 13 793 - -
Trre5g04334 842 Gene3D - 38 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04334 Trre-Chr5 45469199 45471916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04334 8 806 Antiporter Super Family AT2G13620 68.586 0.0 1126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04334 K26731 - gmx:100818927 1298.49