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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre5g04309
ATGGCTACCGCCGCAGACTCGTCCCGCCAACTCTCTCAAAAGGAAGCTGACATCCAGTTGATGTTGGCTGCCGATGTCCATCTCGGCACCAAGAACTGTGACTTCCAAATGGAGCGTTACATTTTCAAACGCCGAAATGACGGTATTTATATTATTAATCTTGGAAAGACTTGGGAGAAGCTTCAACTAGCTGCTAGGGTCATTGTTGCCATTGAGAACCCTCAGGATATCATTGTCCAATCTGCAAGACCTTATGGACAGAGAGCTGTTCTCAAGTTTGCTCAGTACACCGGAGCCCACGCCATTGCTGGAAGGCACACTCCCGGAACCTTCACCAATCAGCTTCAGACTTCCTTCAGCGAGCCTCGTCTTCTCATCCTCACTGATCCAAGAACTGATCATCAGCCAATCAAGGAAGCTGCTCTTGGAAATATTCCCACAATTGCTTTCTGTGACACTGATTCTCCTATGAGATATGTTGACATTGGAATTCCCGCTAACAACAAGGGAAAGCATAGCATTGGTTGTCTCTTTTGGCTTTTGGCTAGGATGGTTTTGCAGATGCGTGGTACTATTCGCCCTGGTCTCAAGTGGGATGTGATGGTTGATCTCTTTTTCTATAGAGAACCAGAGGAGGCCAAGGAGCAAGAAGAGGATGATGTTCCTGCTCCAGATTATGCTATTGCTGATTTCAATGCAGGTTCTATCCCCACTGATGGACAGTGGCCTTCTGCTATTGATCAGCCATGGACTGATGCTGTTCCTGAACCTATTCCAGCGGTTCCTGCTGTCAACTGGTCTGCCCCAGAAGCTGTTGCAGGGGACTGGGGTGAAGCCGTTCCACCACCACAACAAATACCTGCTCCCGGAGTTGAATCCATCCAGGCAACTGGCTGGGAATAA
903
0.485
MATAADSSRQLSQKEADIQLMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKEQEEDDVPAPDYAIADFNAGSIPTDGQWPSAIDQPWTDAVPEPIPAVPAVNWSAPEAVAGDWGEAVPPPQQIPAPGVESIQATGWE
300
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre5g04309
300
ProSitePatterns
Ribosomal protein S2 signature 2.
122
146
IPR018130
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
SUPERFAMILY
Ribosomal protein S2
13
203
IPR023591
-
Trre5g04309
300
FunFam
40S ribosomal protein SA
17
223
-
-
Trre5g04309
300
NCBIfam
30S ribosomal protein S2
14
209
IPR005707
GO:0003735|GO:0006412|GO:0015935
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
97
114
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
48
57
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
18
36
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
122
139
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
139
150
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04309
300
PRINTS
Ribosomal protein S2 signature
160
174
IPR001865
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre5g04309
Trre-Chr5
45192985
45194920
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre5g04309
5
300
Cytoplasmic Ribosomal Protein Gene Family
AT3G04770
71.667
1.49e-149
419
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre5g04309
K02998
-
gmx:548014
538.11
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