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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre5g04304
ATGCCGATAAGAGGAGAAGGTATTTATATTATTAATCTTGGAAAGACTTGGGAGAAGCTTCAACTAGCTGCTAGGGTCATTGTTGCCATTGAGAACCCTCAGGATATCATTGTCCAATCTGCAAGACCTTATGGACAGAGAGCTGTTCTCAAGTTTGCTCAGTACACCGGAGCCCACGCCATTGCTGGAAGGCACACTCCCGGAACCTTCACCAATCAGCTTCAGACTTCCTTCAGCGAGCCTCGTCTTCTCATCCTCACTGATCCAAGAACTGATCATCAGCCAATCAAGGAAGCTGCTCTTGGAAATATTCCCACAATTGCTTTCTGTGACACTGATTCTCCTATGAGATATGTTGACATTGGAATTCCCGCTAACAACAAGGGAAAGCATAGCATTGGTTGTCTCTTTTGGCTTTTGGCTAGGATGGTTTTGCAGATGCGTGGTACTATTCGCCCTGGTCTCAAGTGGGATGTGATGGTTGATCTCTTTTTCTATAGAGAACCAGAGGAGGCCAAGGAGCAAGAAGAGGATGATGTTCCTGCTCCAGATTATGCTATTGCTGATTTCAATGCAGGTTCTATCCCCACTGATGGACAGTGGCCTTCTGCTATTGATCAGCCATGGACTGATGCTGTTCCTGAACCTATTCCAGCGGTTCCTGCTGTCAACTGGTCTGCCCCAGAAGCTGTTGCAGGGGACTGGGGTGAAGCCGTTCCACCACCACAACAAATACCTGCTCCCGGAGTTGAATCCATCCAGGCAACTGGCTGGGAATAA
780
0.4782
MPIRGEGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKEQEEDDVPAPDYAIADFNAGSIPTDGQWPSAIDQPWTDAVPEPIPAVPAVNWSAPEAVAGDWGEAVPPPQQIPAPGVESIQATGWE
259
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre5g04304
259
PANTHER
40S RIBOSOMAL PROTEIN SA
4
258
IPR005707
GO:0003735|GO:0006412|GO:0015935
Trre5g04304
259
NCBIfam
30S ribosomal protein S2
3
168
IPR005707
GO:0003735|GO:0006412|GO:0015935
Trre5g04304
259
Gene3D
-
2
180
-
-
Trre5g04304
259
CDD
RPS2
3
146
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04304
259
ProSitePatterns
Ribosomal protein S2 signature 2.
81
105
IPR018130
GO:0003735|GO:0005840|GO:0006412
Trre5g04304
259
Hamap
40S ribosomal protein SA [rps-0].
4
228
IPR027498
GO:0003735|GO:0006412|GO:0015935
Trre5g04304
259
MobiDBLite
consensus disorder prediction
231
259
-
-
Trre5g04304
259
SUPERFAMILY
Ribosomal protein S2
3
162
IPR023591
-
Trre5g04304
259
PRINTS
Ribosomal protein S2 signature
56
73
IPR001865
GO:0003735|GO:0005840|GO:0006412
Trre5g04304
259
PRINTS
Ribosomal protein S2 signature
81
98
IPR001865
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre5g04304
Trre-Chr5
45088636
45093074
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre5g04304
4
235
Cytoplasmic Ribosomal Protein Gene Family
AT3G04770
73.967
3.22e-121
345
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre5g04304
K02998
-
gmx:100805318
462.225
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