Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04266 ATGGAATATGATTGTGATTTTAAAGGCAAATTGATAGAAGAAAGAAACAACAAAAACTACTACTATATTCTAAAATCCAAAATCGGAGAAGGTTCTTCCTCCACAGTTTGGAAAGCTCAACAAAAACCCACCGGTAAAGATGTTGCGGTCAAGCAAATCTTCCTCTCCAAACTCAACTCTCGTCTTAAAGCTTCATTGGACTGTGAGATCAATTTTTTGTCTTCTGTTAATCATCCCAATATTGTTCAACTTCTTCACTTTTTTCAGGGTGATGGATGTGTTTACTTGGTTCTTGAGTTTTGTGCTGGTGGGAATTTAGCTTCTTATATTCGTTGCCATGGAAGAGTTCAACAACTAACTGTTAGATTTTTCATGCAGCAACTTGGATCTGGTTTAAAAGTACTACGCTCTCACGGCATCATTCATAGAGACTTAAAACCCGAGAACATTTTGCTATCAAGTCATGGGGCTAATGCAGTGCTAAAGATATCTGATTTTGGTCTCTCAAGAATTGTACGCCCTGGTGAGTATGTTGAGACAGTTTGTGGAACTCCATTATACATGGCTCCTGAAGTTCTTCAGTTTCAAAAATATGATTACAAGGCAGATATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTGTAAATGGTTATCCACCTTTTAATGGTAGAAATAATGTTCAGGTGTTAAAAAACATCAGATCCTGTACCTCTCTTCCATTTTCTCAATCGATTCTTTCAGGATTGGATCCTTCTTGTCTTGATATTTGTTCAAAACTACTATGCTTAAATCCAGTGGAGCGCCTTTCTTTTGATGAATTTTATTTGCATAGTTTTCTACGAGGAAAATCATCGGGACCTTGA 864 0.3715 MEYDCDFKGKLIEERNNKNYYYILKSKIGEGSSSTVWKAQQKPTGKDVAVKQIFLSKLNSRLKASLDCEINFLSSVNHPNIVQLLHFFQGDGCVYLVLEFCAGGNLASYIRCHGRVQQLTVRFFMQQLGSGLKVLRSHGIIHRDLKPENILLSSHGANAVLKISDFGLSRIVRPGEYVETVCGTPLYMAPEVLQFQKYDYKADMWSVGAILFELVNGYPPFNGRNNVQVLKNIRSCTSLPFSQSILSGLDPSCLDICSKLLCLNPVERLSFDEFYLHSFLRGKSSGP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04266 287 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g04266 287 SUPERFAMILY Protein kinase-like (PK-like) 19 282 IPR011009 -
Trre5g04266 287 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Trre5g04266 287 FunFam Maternal embryonic leucine zipper kinase 13 286 - -
Trre5g04266 287 Gene3D Transferase(Phosphotransferase) domain 1 13 287 - -
Trre5g04266 287 Pfam Protein kinase domain 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g04266 287 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 18 281 IPR045269 GO:0004674|GO:0006914
Trre5g04266 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Trre5g04266 287 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04266 Trre-Chr5 44644410 44647959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04266 22 282 CBL-interacting serine-threonine protein kinases AT2G30360 37.175 1.59e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Trre5g04266 Pkinase 8.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04266 - - lja:Lj1g3v1289070.2 462.611