Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre5g04262 | ATGGCTGCCATGAACTCAAGTGTATTGGCTTGTAGCTATGCCTTATCTGGTTGTTCTGAGCTCAATGCAAAGCTCATTTCTATGCCCTCTGTTGCATCACCTGTAGGTGTTTCAGGTTCCAAATTACCATTGATCAAAGCTCAGCAAGTCAGAGTTCCTGAAGCCAAAGAATCAAGACCAAGTGATGGTAGGAGAAATGCTATTGCTTTATTAGCAGCTACCCTTTTCACCACTGCTGTTTCTGCTTCCAATTCATCTGCTAATGCTAGTGTTTTTGATGAATACCTTGAAAAGAGCAAGGCCAACAAGGAATTGAATGACAAGAAAAGATTAGCTACTAGTGGAGCAAACTTTGCAAGAGCATACACAGTGCAATTTGGTACTTGCAAGTTCCCTGAAAATTTCACTGGTTGTCAAGATCTTGCTAAACAGAAGAAAGTACCATTCATTTCTGAAGATTTGGAACTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA | 525 | 0.4 | MAAMNSSVLACSYALSGCSELNAKLISMPSVASPVGVSGSKLPLIKAQQVRVPEAKESRPSDGRRNAIALLAATLFTTAVSASNSSANASVFDEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKYKCGSNVFWKW | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre5g04262 | 174 | FunFam | Photosystem I reaction center subunit N | 90 | 174 | - | - | |
Trre5g04262 | 174 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 174 | IPR008796 | GO:0009522|GO:0015979 | |
Trre5g04262 | 174 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 44 | 174 | IPR008796 | GO:0009522|GO:0015979 | |
Trre5g04262 | 174 | Gene3D | - | 90 | 174 | IPR044907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre5g04262 | Trre-Chr5 | 44539707 | 44540824 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre5g04262 | 1 | 145 | Calmodulin-binding Proteins | AT5G64040 | 65.333 | 3.97e-56 | 173 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre5g04262 | K02701 | - | tcc:18611871 | 264.233 |