Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04249 ATGGAAGGAAAAAAGCCATATGTGGTTGTGTTTGTGATACAAACTATATATGCAGCTATGTTTCTACTATCAAAAGCTGCATTTGATCATGGAATGAACAATTTCATCTTTGTTTTCTATAGACAAGCAGTAGCTACCATTTTCCTTATACCTTTTGCTTTCATCTTTGAATGGAAATTTGCACCCCATTTGTCTTTCAGGACCTTCTGCAAGATTTTCCTTCTTTCTTTTTGCGGGATTACTTTGAGCTTGGATATATATGGTATTGGTTTGATTTACACCTCTCCAACTTTGGCAGCTTCTACCACAAATTGTCTTCCAGTTATCACCTTCTTTTTAGCACTCATACTTGGGGTTGAAAGTTTGAAAATAAAGACAAGAGCTGGGATTGCTAAATTGATAGGCATTGTGGCATGTTTGGCTGGTGCATCTACCCTTGCCTTTTATAAAGGTCCTCATTTAAAACTTTTAAGTCATCATCATCATATTCTAGGATACCATAAACAACATGATCAAAGTCATATTCCATATGGTACATGGATAAAAGGTTGCTTCCTCATGTTGCTCTCCAACACATTTTGGGGTCTATGGTTGGTGTTACAGGCTTTTGTAATAAAAGACTACCCGTCAAAGCTGATATTTACAACTCTTCAATGTTTCTTAAGCTCAATTCAATCGTTAGTTATCGCCTTGGCCATAGAAAGGGACATTGAGCAGTGGAAATTGGGTTGGAATATCACTCTTCTTGCTGTAGCTTATTGTGGAATTATTGTGACAGGGGTGTCATATTACTTAATGACATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTTGCAATGTCAACACCACTAGCTCTCATTATTACAATATTGTCATCTATAATTCTCTTGGGGGATATAATAAGCTTGGGAAGCGTGTTAGGTGGGTTACTTTTAATTGTGGGACTATATAGTGTGCTTTGGGGAAAGAACAGAGAGCAAACACCAAAAGCTTCCCAAGATTTGGAACAGCCATCATCGGTCTAG 1026 0.3762 MEGKKPYVVVFVIQTIYAAMFLLSKAAFDHGMNNFIFVFYRQAVATIFLIPFAFIFEWKFAPHLSFRTFCKIFLLSFCGITLSLDIYGIGLIYTSPTLAASTTNCLPVITFFLALILGVESLKIKTRAGIAKLIGIVACLAGASTLAFYKGPHLKLLSHHHHILGYHKQHDQSHIPYGTWIKGCFLMLLSNTFWGLWLVLQAFVIKDYPSKLIFTTLQCFLSSIQSLVIALAIERDIEQWKLGWNITLLAVAYCGIIVTGVSYYLMTWVIEKKGPVFLAMSTPLALIITILSSIILLGDIISLGSVLGGLLLIVGLYSVLWGKNREQTPKASQDLEQPSSV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04249 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Trre5g04249 341 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trre5g04249 341 Pfam EamA-like transporter family 6 136 IPR000620 GO:0016020
Trre5g04249 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Trre5g04249 341 PANTHER WAT1-RELATED PROTEIN 6 330 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04249 Trre-Chr5 44449367 44454441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04249 1 254 Nodulin-like Gene Family AT5G64700 61.240 2.69e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04249 - - gmx:100804562 489.96