Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04156 ATGGATCTTGAACCTGGGAAGTGTTGGGACAACTCAAAGGGTTCTTGGAAGACTATTATGCTTTTGGCTTACCAAAGTCTTGGTGTTGTATATGGTGACTTGAGTATTTCTCCATTGTATGTTTTCACAAGTACTTTTGCTGAAGATATTGAACATTCTGAAACTAATGAAGAGATTTATGGCACACTTTCTTTTGTTTTTTGGACTTTGACATTGATTCCACTTTTCAAATATGTGTTTGTTGTTCTTAGAGCTGATGATAATGGAGAGGGTGGTACTTTTGCTCTTTATTCATTGATTTGTAGGCATGCAAAAGTGAGTCTTTTACCTAATAGACAGCATGCTGATGAAGCACTTTCTTCATATAAGATGGAGGAGCCTCCAGAGAAAGATAATTCTAAAGTGAAGATGCTACTTGAGAAGTATAAGACTTTGCATACTGCTTTGTTGATTGTGGTTCTTCTTGGTACTTGTATGGTAATTGGGGATGGAGTGCTTACACCAGCCATTTCTGTTTTCTCAGCAGTATCTGGTCTTGAGGTATCCATCATGTCCAAGAAACACCATCAGTATGCTGTGATTCCTATCACTTGCTTCATACTGGTGTGTTTATTTGCACTTCAACACTATGGTACACATAAGGTGGGATTCTTTTTTGCACCAATTGTGTTGACATGGTTACTGTGCATCAGCACGCTCGGCTTATATAATATATTCAAATGGAATACACATGTATATAAAGCTCTTTCGCCGTATTATATGTTCAAGTTCTTGAAAAAGACAAGGATAAGTGGATGGCTTTCTTTGGGTGGAATATTACTTTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCAATTATATGGCCATTCAGATTGCGTTCACCTTTTTGGTATATCCTGCACTTATATTAGCATATATGGGTCAAGCTGCTTACTTGTCACAACATCATAATGCTGATCTCCAAATCAGCTACTACGTCTCCGTTCCAGAAAGCGTGAGGTGGCCGGTGCTTATCTTAGCTATTCTAGCTTCTGTTGTTGGGAGCCAAGCAATCATCAGTGGAACATTTTCTATCATAAATCAGAGTCAATCTCTTGGCTGCTTCCCAAGAGTTAAGGTTGTTCATACATCAGACAAGATACATGGTCAGGTCTACATACCGGAAATTAATTGGATGCTCATGATTCTCTGCATTGCTGTCACCATTGGGTTTAGAGACACAAAACACCTGGGAAATGCATCAGGGCTAGCAGTGATGACCGTGATGTTGGTAACAACGTGCCTAACTTCTTTAGTGATTGTAGTTTGTTGGAATAAACCGCCGATTTTAGCCCTTTGTTTCCTATTGTTTTTTGGTTCTGTTGAACTGCTATATTTCTCGGCTTCACTGACAAAGTTCCGTGAGGGTGCCTGGCTGCCAATCCTCCTTGCCCTCTTCCTAATGATTATAATGTTCCTCTGGCACTACGCAACAATCAAGAAATACGAATATGACCTTCACAACAAGGTTTCACTAGAATGGCTTCTAGCTTTAGGTCCAAGCTTAGGAATTGCTAGAGTCCCTGGAATAGGCCTCGTGTTCACTGATCTCACCACTGGCATTCCAGCAAACTTCTCTCGCTTTGTCACCAACCTCCCTGCTTATCACCGCGTTCTTGTTTTCGTTTGTGTAAAATCAGTACCAGTTCCTCATGTAACCCCTGCAGAGAGGTACCTTGTAGGCCGTGTAGGACCAGCTGCTCATCGATCCTATCGGTGTATAGTCAGATATGGATATCGCGACGTTCATCAGGATGTTGATTCCTTTGAAACCGAACTAATAAAAAAGTTGTCTGATTTTATCCAATACGATTGGTATCGAACTCGTGCGAACAGCATGAGCATTGAAGACGATGGTTCGCACTCAAACGAATCATCGAGTTACAGATTAACTGTGATTGGAACAACTAGCTTCTGCAGCCAACAAGGATACGAGAGTCAGCAGAGTGTTCAGCAAGGAAGCGTGTCTGCTGGATTCCCAACTGTACAAAGCCTGACAGATGTTATCGAGATGGAACCGGTCGATCATGCGGCCGAAAGACGAGTAAGGTTTGCTATTGATGACGATCGTGAAAGTGACACAAGGTCTGAAGTTGGTGTGCAAATGCAAGAAGAGCTTGAAGATCTTTATGCTGCTCAAGAAGCTGGCATAGCATTCATTCTTGGACATTCTTATGTGAAAACAAAGCAAGGTTCATCACTGTTGAAGAAGTTGGCACTTAACTATGGATACAATTTCTTGAGAAGGAATTGTAGAGGGCCTGATGTGGCTCTTAAGGTTCCACCAGTTTCTCTATTGGAGGTTGGCATGGTTTATATTGTGTAG 2379 0.414 MDLEPGKCWDNSKGSWKTIMLLAYQSLGVVYGDLSISPLYVFTSTFAEDIEHSETNEEIYGTLSFVFWTLTLIPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSSYKMEEPPEKDNSKVKMLLEKYKTLHTALLIVVLLGTCMVIGDGVLTPAISVFSAVSGLEVSIMSKKHHQYAVIPITCFILVCLFALQHYGTHKVGFFFAPIVLTWLLCISTLGLYNIFKWNTHVYKALSPYYMFKFLKKTRISGWLSLGGILLCITGSEAMFADLGHFNYMAIQIAFTFLVYPALILAYMGQAAYLSQHHNADLQISYYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWMLMILCIAVTIGFRDTKHLGNASGLAVMTVMLVTTCLTSLVIVVCWNKPPILALCFLLFFGSVELLYFSASLTKFREGAWLPILLALFLMIIMFLWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRVLVFVCVKSVPVPHVTPAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFETELIKKLSDFIQYDWYRTRANSMSIEDDGSHSNESSSYRLTVIGTTSFCSQQGYESQQSVQQGSVSAGFPTVQSLTDVIEMEPVDHAAERRVRFAIDDDRESDTRSEVGVQMQEELEDLYAAQEAGIAFILGHSYVKTKQGSSLLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04156 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre5g04156 792 NCBIfam potassium uptake protein 22 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre5g04156 792 Pfam K+ potassium transporter 24 599 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04156 Trre-Chr5 43195318 43199248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04156 1 792 Inorganic Solute Cotransporters AT2G40540 78.012 0.0 1272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04156 K03549 - gmx:100783540 1414.05