Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04104 ATGGACAGGAAATTGCCAAAATCGTCGGGGAGAACCTGCATAAATAGAGTTTTGAATAGCAAAAATAGTATATTAACCGATGAGGCATATGGATTGCCATTTTTGACTGCCTTGCAAAATCTCACCAGAGACCAAGACATTAAGAAAGGAGTGAATTTTGCATTTGCTGGCTCCAGTGCTCTTGAATATAAGTTTTTCACACAACATGCAGTCACGCCACCAGCGACAAGTAACTCATTAAGTGTTCAACTTAGTTGGTTTAAGGAGCTAAAACCATCCCTCTGTAAAAGCAAAGAAGAGTGTGATGCCTACTTCAAAAAATCATTGTTTTTGGTTGGAGAGATCGGCGGAAATGATATTTTGTCGCATGTTCTCACAAATAAACCTGTTATAGAAATTCGAAAAATCGTGCCCTTAATGGTTGAAGAGATTGCAAATACTGCCTTCGCATTAATTGATGAGGGAGTGACAGAGCTAGCGATTCCCGGTAACTTTCCAATTGGGTGTAATGCTGTTTTTTTATCAATTGTGGATAGTAAGAAGAAAGAAGACTACGATGAACTTGGGTGCTTGATAGCTTACAATACTTTAGCAGAATACTTTAATGAGCAACTCAAAAATGCCATAGACACGTTACGAAAGAACAACCCTCAAGCTAAGATAATATATTTTGATTACTACAATAATGATCAAGCGCCGCAACAATATGGTTTTACTTCTGATAAGAACGAGATTTTGAAAGCATGTTGTGGATCAAATGCACCATATAATGTCGATGTAAAGAAACCATGTGGAACTACTGGCACGACAATTTGTTCAGACCCTTCAAAGCAAATAAATTGGGACGGAGCCCACTTAACAGAAGCTGCTTATAGAATGATTGCAAAGGGATTAGTCGAAGGCCCTTTTGCAACCCCTTCACTTAAAACTCCTCCTGTCAAGATAGCTTAG 951 0.3859 MDRKLPKSSGRTCINRVLNSKNSILTDEAYGLPFLTALQNLTRDQDIKKGVNFAFAGSSALEYKFFTQHAVTPPATSNSLSVQLSWFKELKPSLCKSKEECDAYFKKSLFLVGEIGGNDILSHVLTNKPVIEIRKIVPLMVEEIANTAFALIDEGVTELAIPGNFPIGCNAVFLSIVDSKKKEDYDELGCLIAYNTLAEYFNEQLKNAIDTLRKNNPQAKIIYFDYYNNDQAPQQYGFTSDKNEILKACCGSNAPYNVDVKKPCGTTGTTICSDPSKQINWDGAHLTEAAYRMIAKGLVEGPFATPSLKTPPVKIA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04104 316 Gene3D SGNH hydrolase 10 301 IPR036514 -
Trre5g04104 316 Pfam GDSL-like Lipase/Acylhydrolase 33 296 IPR001087 GO:0016788
Trre5g04104 316 SUPERFAMILY SGNH hydrolase 156 298 - -
Trre5g04104 316 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 28 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04104 Trre-Chr5 42699635 42700927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04104 5 300 Pollen Coat Proteome AT1G75910 25.559 1.32e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04104 - - gmx:100794616 379.022