Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04101 ATGGTGGCAACTGGAATTGCAGCATCAGCATACACTCACATACACCTCACAGAAGTTTCCGCTTCAAAATCAATGGAATTGAAATGGGTAAGAACAAAAATCACCAAAACCTCACCACTTAACAACAACAAAGAAAAATTGCTATCCACACCCCTTCTCCCAGTTTACATTTCCACTAATCCACAACACATCGATCCTCAAAATCTCCGAAACCTCTGCTACACTTGCAACCACTCTTTCAACAGATTCCCCAACCTCAAAAACTCCGAAACCTCTGAACCTGTTAATATCAAAAAGCTTCGCATTGCTCTTTCTCACAGTGATGTTCTTGTTTCTGTCTTCTGTAAACCTCATCTTGTTGATGGTTTAGTTGAACCTTCATCTTCTATTGTGGATTTCTTCACTCCGGTTTCACCTTCACGTGATTTGTTGGTTGGGTTTGGTCGTGCTGTTTCTGATTGTGGTCTCACTGCTTCTATTTATGATGTCATGGTTATTCCATCCTTGCGGAGAATGGGAATTGGAAAAATTATTGTTAAGAAAATTTTGAGATTGCTTACAAATAAAGACATCTATGACATAGCAGCCCTTTGCTCAGAGGATGAGAGGTTGTTTTTTAAGGCTTGTGGATTTGGTGGTGACATTTTGGACTCTACTACCATGATGTACACAAGAACCGCTTCGTCAACAATCCAGGAAGGTGAGCAAACCGTCACACGCGCAGGCCGAAAGCTATTGTTGGTTCCACCTCTGATTGAGAGACCCTACAAATCATCGAGGACAATAATATAG 792 0.4116 MVATGIAASAYTHIHLTEVSASKSMELKWVRTKITKTSPLNNNKEKLLSTPLLPVYISTNPQHIDPQNLRNLCYTCNHSFNRFPNLKNSETSEPVNIKKLRIALSHSDVLVSVFCKPHLVDGLVEPSSSIVDFFTPVSPSRDLLVGFGRAVSDCGLTASIYDVMVIPSLRRMGIGKIIVKKILRLLTNKDIYDIAALCSEDERLFFKACGFGGDILDSTTMMYTRTASSTIQEGEQTVTRAGRKLLLVPPLIERPYKSSRTII 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04101 263 CDD NAT_SF 144 191 - -
Trre5g04101 263 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 56 222 IPR039143 GO:0004343|GO:0006048
Trre5g04101 263 Gene3D - 54 214 - -
Trre5g04101 263 Pfam Acetyltransferase (GNAT) family 144 211 IPR000182 GO:0016747
Trre5g04101 263 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 141 211 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04101 Trre-Chr5 42648699 42650494 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre5g04101 Acetyltransf_1 2.1e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04101 - - lang:109338220 306.219